Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00052 218 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Accr10g00052 218 MobiDBLite consensus disorder prediction 27 57 - -
Accr10g00052 218 ProSitePatterns 'Homeobox' domain signature. 83 106 IPR017970 GO:0000981|GO:0006355
Accr10g00052 218 Coils Coil 128 155 - -
Accr10g00052 218 Coils Coil 100 120 - -
Accr10g00052 218 PRINTS Lambda-repressor HTH signature 88 104 IPR000047 GO:0003677
Accr10g00052 218 PRINTS Lambda-repressor HTH signature 79 88 IPR000047 GO:0003677
Accr10g00052 218 SUPERFAMILY Homeodomain-like 52 115 IPR009057 -
Accr10g00052 218 Pfam Homeodomain 53 107 IPR001356 GO:0003677
Accr10g00052 218 SMART HOX_1 51 112 IPR001356 GO:0003677
Accr10g00052 218 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 32 169 IPR045224 GO:0003700
Accr10g00052 218 Gene3D - 46 117 - -
Accr10g00052 218 CDD homeodomain 53 109 IPR001356 GO:0003677
Accr10g00052 218 FunFam homeobox-leucine zipper protein ATHB-40 47 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00052 Accr-Chr10 680285 681834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00052 14 218 Homeobox Transcription Factor Family AT2G18550 52.074 5.57e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr10g00052 Homeodomain 3.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00052 K09338 - gmx:100809616 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00241 9 2705463 2707064 Accr10g00052 10 680285 681834 CCT
Accr10g00052 10 680285 681834 Accr10g00052 10 680285 681834 ECH