Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00049 ATGGCCAAACGTTTCAAGTTTCGAATATCCCGTCTTATCATCCCCTGTTTCCGATCTTGCTGCTCCAAACACCCCTCCACCCCCCTCTCCCCCTTCCACGACGGCGACGACTTCCTCTGGAAAAAGGAAGACAAATGGCACGTCATCGACAAGGTCCCGGACCACCACCACACCAGCACTCCTTCTCGCCGGAAAGTCCACAACTCCTCCTCTGCCTCCGGCGACGCATTGCCTCTTCCATCACCCAAACGGCGGTATAAGAAGAAGAAGAAAAGGACGACCACACCAAGAGGCCGTGGCCGTACAAGCCGTTTCAGCACTTCCTCAGCTGATCGCAGCTGTGGTTTGTTCAGCAGCGACAGCTACAACGACGATGAGGAAGAAACGGAAGCTCTAGTTTCGTCTTCAAGAAGCGACACGCCGCCGCCACCTAACAGAGAACACAAGTTGAAGCAGAGGAAGGAGAAGCCGCCGGTGTGGTGGGTGGCGGCGAGGGTGTCGGCGTTCGAGGGGATGATGGGGTGGAAGGTGGAGGGGAAGGTGAGGGAGAGCGTGGCAGTGGTGAAAAAGTCGGAGGATCCGTACCACGATTTCAGGAGATCGATGATGGAGATGATTGTGGAGAAGAAGATGTTTGAGCAGAAAGATTTGGAGCAACTCTTGTGTTGCTTCTTGTCTCTTAATTCCACTAAATATCATCCCATCATTGTTCAGGCTTTCACTGACATTTGGAAAACTCTCTTCTGCTTTTCTGCCTCAACAACATCTGAATTTCATTCTCAAAGATGA 789 0.5222 MAKRFKFRISRLIIPCFRSCCSKHPSTPLSPFHDGDDFLWKKEDKWHVIDKVPDHHHTSTPSRRKVHNSSSASGDALPLPSPKRRYKKKKKRTTTPRGRGRTSRFSTSSADRSCGLFSSDSYNDDEEETEALVSSSRSDTPPPPNREHKLKQRKEKPPVWWVAARVSAFEGMMGWKVEGKVRESVAVVKKSEDPYHDFRRSMMEMIVEKKMFEQKDLEQLLCCFLSLNSTKYHPIIVQAFTDIWKTLFCFSASTTSEFHSQR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00049 262 MobiDBLite consensus disorder prediction 99 120 - -
Accr10g00049 262 MobiDBLite consensus disorder prediction 83 98 - -
Accr10g00049 262 Pfam Transcriptional repressor, ovate 191 248 IPR006458 -
Accr10g00049 262 MobiDBLite consensus disorder prediction 52 154 - -
Accr10g00049 262 NCBIfam uncharacterized plant-specific domain TIGR01568 185 247 IPR006458 -
Accr10g00049 262 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 248 IPR038933 GO:0045892
Accr10g00049 262 ProSiteProfiles OVATE domain profile. 187 246 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00049 Accr-Chr10 643910 644698 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr10g00049 Ovate 2.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00049 - - pcin:129310490 337.806