Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00042 ATGTCCTCCTCATCCCCTGAAACTGCTCCATCTTCAGATTCTGGTAATAGTACTGATACTAATAACAATAACAACAACAACAATGATAATAATAATAATGATGATGATGGAGATTCATCTCAAAGCCCTCCATCACCCCCACCACCAGACCAGCAGGCGGCATCACCACCACCACCGCCATCATCTGACCAGAACTCTTCCAGTTCCAATAGTTCCGATTCTGGTTCTTCGTCGAATAACCAAGGCTCTTCTGGTAGCAAATCGCCATCTCCACCTTCAAGTCGTTCACCGGATAATGATAATGGTGATAAATCTTTGGGTTCTGGTTCATCATCATCCTCTGGATCGTCGTCACCTTCAACACCGAATTTAACACCAAAATCTTCTGGTGAGAGCAACAAGCAGTCGCCTCCAGCTGCATTATCAGGTTCCAGCGAAAATAGCAGCGGCGACAAGAATGACGATAGTAGGGCGGTTATTGGAGCCCTTGTTGGTGTAGGGTTTGTTCTTCTTATGATGCTCGCCGTCTGTATCTTTTGTTGCAGAAGGAAGAGGCGAAAGCATAGGTATTATTATAGCGATGATATCAAACCCAGCAAAACTGGAAGTAATTATTACAACAGAGGACACAACGCAAATAATTGGCGCCCTGGTGGGAATGACCATGTTGTGAGGATGCAACAATCACCAGGCATGGGCATGGGCCCGGATAGTGGTGGGTGGGGCCCAGTTCCACCACCTCCTCCGCCACACAGCACCGATATGAGCTCCAATTACTCATCACTGGGGCCGCCGCCGCCGCCGCCGTCCCCGCCACTGTCTTTAGGGCTGAATTGTGGGACCTTCTCTTATGAAGACTTGGCTGCTGCAACGGAGGGCTTTGCTGAAAAGAATATGATTGGACAAGGAGGTTTTGGTTACGTATATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCTGTGAAGAGCCTGAAGGCTGGTAGTGGCCAAGGAGAGCGCGAGTTCCAAGCTGAGATCGAAATTATTAGTCGTGTTCATCATCGCCATCTCGTGACGCTTCAGGGTTACTGTATTGCTGGTGGACAACGAATGTTGGTTTATGAATTTGTTCCCAACGACACTCTTGAGCATCACCTTCATGGAAAGGGTTTGCCTACCATGGCTTGGCCTGACAGAATGAGAATTGCAGTAGGATCTGCCAAAGGGCTGGCATACCTTCATGAAGACTGTCATCCTCGAATTATCCATCGCGATATCAAATCTGCCAATGTCCTCCTTGATGATAGCTTCGAGGCTAAGGTGGCTGATTTCGGATTGGCTAAGTTGACTACTGAGAATAATACTCATGTCTCAACTCGGGTCATGGGAACATTCGGGTACTTAGCTCCAGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTTGGAGTGATGTTATTAGAAATTATAACAGGAAAGCGACCTGTGGATATCCAAAATATTATAGACGATAGCTTAGTAGACTGGGCTCGACCACTACTGGCAAGAGGGCTGGAGGATGGCAACTTTGAAGAGCTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCACGTATGGCTGCTTGTGCTTCTGCTAGCATTCGTCATTCTGGCAAGAAACGTCCTAAAATGAGCCAGATTGTAAGAGCACTGGAAGGAGATGTGTCACTGGACGACTTGAACGAAACAAGGGCAGGGCATGGCCACCATCTGGCATCTACATCGAGCTCAGATTACGATACAACTGCATATCAGGCTGACATGAAGAGGTTCAGACAAATAGCTCTTGCTACCCAAGAATTTGGAAGCAGTGAATCAAGCGGTGAGATGTCTCAGAATCCAAGGCAACACCTTTAG 1902 0.47 MSSSSPETAPSSDSGNSTDTNNNNNNNNDNNNNDDDGDSSQSPPSPPPPDQQAASPPPPPSSDQNSSSSNSSDSGSSSNNQGSSGSKSPSPPSSRSPDNDNGDKSLGSGSSSSSGSSSPSTPNLTPKSSGESNKQSPPAALSGSSENSSGDKNDDSRAVIGALVGVGFVLLMMLAVCIFCCRRKRRKHRYYYSDDIKPSKTGSNYYNRGHNANNWRPGGNDHVVRMQQSPGMGMGPDSGGWGPVPPPPPPHSTDMSSNYSSLGPPPPPPSPPLSLGLNCGTFSYEDLAAATEGFAEKNMIGQGGFGYVYKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVTLQGYCIAGGQRMLVYEFVPNDTLEHHLHGKGLPTMAWPDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTTENNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPVDIQNIIDDSLVDWARPLLARGLEDGNFEELVDPFLEGNYNNQELSRMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNETRAGHGHHLASTSSSDYDTTAYQADMKRFRQIALATQEFGSSESSGEMSQNPRQHL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00042 633 SUPERFAMILY Protein kinase-like (PK-like) 267 566 IPR011009 -
Accr10g00042 633 ProSiteProfiles Protein kinase domain profile. 294 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00042 633 FunFam proline-rich receptor-like protein kinase PERK1 272 369 - -
Accr10g00042 633 MobiDBLite consensus disorder prediction 1 154 - -
Accr10g00042 633 Gene3D Phosphorylase Kinase; domain 1 274 369 - -
Accr10g00042 633 Pfam Protein tyrosine and serine/threonine kinase 297 564 IPR001245 GO:0004672|GO:0006468
Accr10g00042 633 MobiDBLite consensus disorder prediction 201 220 - -
Accr10g00042 633 Gene3D Transferase(Phosphotransferase) domain 1 370 581 - -
Accr10g00042 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Accr10g00042 633 MobiDBLite consensus disorder prediction 41 63 - -
Accr10g00042 633 FunFam Proline-rich receptor-like protein kinase PERK1 370 577 - -
Accr10g00042 633 SMART serkin_6 294 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00042 633 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Accr10g00042 633 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 165 610 IPR047117 -
Accr10g00042 633 MobiDBLite consensus disorder prediction 227 272 - -
Accr10g00042 633 MobiDBLite consensus disorder prediction 64 149 - -
Accr10g00042 633 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00042 Accr-Chr10 558101 562137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00042 167 626 Trihelix Transcription Factor Family AT1G70460 51.931 5.07e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr10g00042 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00042 - - gmx:100805872 619.002