Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00040 ATGTCTGACTCACCCCTGACTCCTCTCTGTTCTATCATATCTCTCCTCTTTCCTCTTCTTCTCATCGTCATCATCTTCTTCTTCAGAAGAAAACACCCCAGGCTTAATCTTCCTCCTGGAAGAATGGGTTGGCCTTTTATTGGTGAAACCATTGGCTATCTCAAGCCCTATCCTGCTACTACTGTTGGAGACTTCATGGAGCAGCACATAGCAAGGTATGGTAAGATTTACAAGTCCAAGTTGTTTGGGGAACCAGCTATAGTGTCAGCAGATGCAGGGCTGAACAGGTACATATTACAGAACGAAGGGAAATTGTTCGAATGTAGCTATCCCAGAAGCATTGGAGGAATCCTGGGAAAATGGTCTATGTTGGTGTTGGTTGGTGACATGCATAGAGATATGAGGGCTATATCTTTGAACTTTCTCAGCCATGCCAGGCTACGAACGCATCTGTTGAAAGAGGTTGAGAAGCATACCCTGCTTGTTCTTAGCTCATGGAAGGAAAATTGTACATTCTCCGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCAGACCATATTATGAGTTTAGATCCTGGGAATCTTGAAACAGAGCTATTGAAGAAAGAGTATGTGACGTTCATGAAGGGGGTGGTTTCAGCTCCTTTGAATTTTCCCGGAACTGCGTACAGGAGGGCCTTAAAATCTCGGTCAACCATACTGAATTTCATAGAGGTGAAAATGGAAGAAAGAGTGAAGAGAATGGAGGAGAATGAAAATCTGGAGGAAGATGATCTTCTGAACTGGGTTCTGAAGCATTCGAATCTCTCAACAGAGCAGATTCTGGACTTGATTCTGAGCTTGCTCTTCGCTGGACATGAAACTTCATCTGTAGCTATAGCTCTTGCTATTCACTTCTTACCTGGCAGTCCTCGAGCAATACAGCAACTAAGGGAAGAACACATAAAAATAGCGAAAGCTAAGAAGGAAGCAGGAGAAGTGGAATTGACTTGGGAAGACTACAAAAGCATGGAATTTACCCACTGTGTGGTGAACGAGACCCTTCGGCTGGGAAACGTTGTGAGGTTCCTTCACAGGAAGGCTCTCAAGGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCTTGCCTGTGGTTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAGCAACAATAATGGAAGCAGTACTACTTGTATTGAAGGATCTTGCCCAAGTGGAAGCAGCAACAGTACGGCGAGCCAAATCTTCATGCCGTTCGGCGGAGGGCCGAGGCTGTGCGCCGGATCCGAATTGGCTAAAGTGGAAATGGCTGTGTTCATTCACCATCTCATCCTCAACTTTCAGTGGGACCTAGCTGATGAGACTGATCAAGCTTATGTCTACCCTTTTGTTGATTTTCCTAAAGGCCTTCCCATCAAAGTCCATCGTCACTCTTTGATTTGA 1500 0.4513 MSDSPLTPLCSIISLLFPLLLIVIIFFFRRKHPRLNLPPGRMGWPFIGETIGYLKPYPATTVGDFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRYILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRAISLNFLSHARLRTHLLKEVEKHTLLVLSSWKENCTFSAQDEAKKFTFNLMADHIMSLDPGNLETELLKKEYVTFMKGVVSAPLNFPGTAYRRALKSRSTILNFIEVKMEERVKRMEENENLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIHFLPGSPRAIQQLREEHIKIAKAKKEAGEVELTWEDYKSMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVVAAVHLDPSLFDQPQHFNPWRWQSNNNGSSTTCIEGSCPSGSSNSTASQIFMPFGGGPRLCAGSELAKVEMAVFIHHLILNFQWDLADETDQAYVYPFVDFPKGLPIKVHRHSLI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00040 499 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PANTHER CYTOCHROME P450 26 33 473 - -
Accr10g00040 499 FunFam Cytochrome P450 90B1 27 495 - -
Accr10g00040 499 Coils Coil 240 261 - -
Accr10g00040 499 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 Pfam Cytochrome P450 38 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 CDD CYP90-like 69 495 - -
Accr10g00040 499 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Accr10g00040 499 PRINTS E-class P450 group IV signature 340 356 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS E-class P450 group IV signature 64 87 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS E-class P450 group IV signature 278 304 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS E-class P450 group IV signature 429 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr10g00040 499 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00040 Accr-Chr10 506699 511256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00040 29 420 Cytochrome P450 AT3G50660 72.947 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00040 K09587 - gmx:100802498 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00223 9 2454816 2459981 Accr10g00040 10 506699 511256 CCT
Accr10g00040 10 506699 511256 Accr10g00040 10 506699 511256 ECH