Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00003 ATGGCCGAGGTTGCGGTATCAATAGTCGTCGAAAAGCTTTCAGAACTTCTTGTCGAACAAGCAGTAAACGCAGTTTCTGTGCTAGACGGTGTGCGCCACGACGTAGAGACGCTGAATAATGACTTACGATGGATGCAATGCTTTCTGAGGGACGCCGATGCTAAACAAGAAGAAAACCAACTGGTTCGATTGTTGGTTTCTGATATTAGAGATATTGCTTTTGAAGCTGAGGAGGTAATAGAGATTTATGTTTACAAGGTAGCATGCCAAAGCAGATGGGACAGAGTCTTCAGATCCTTACATCTCTACGAGGTCTCCAGAAAGATCGACCGAATTCGATCGAGGATACATGATGTATCTAAAAAGCGAGAAACGTACGGCGTTGTCAGCGAAAGACGGGGGCAAAATAGTATCAATGATAGGTTGAGGCACTGGAGACAGCCATGGCCGTACACTGAAGAGGAGTGTGTAATTGAGCTTGAAGATGACATGGAATTCCTACTCAATCAACTGCTTGCAGTGGACGCTGGGCGGGTGGTTTCTATACTTGGTATGGGGGGTTTGGGTAAAACCACCTTAGCCAAGAAATTGTATAATCACAGCAAAATTCATAACCATTTTGATTGTAGAGCTTGGGTTTATGTGTCCAAAGAGTACAGAAAAAGAGACATTTTGCTAGGAATTCTCAAAGACGCAGATTCTTTCGGTGGAAATGAAATTGAAAGATTGGAGAGATTGCGGGAGGAAGACATGATGAACCGGCTGCATACTATCTTGGATGAGAAAAGGTATCTGGTAGTCCTTGATGACATTTGGAGCATGGAGGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGATGGGTAGTAAAATTTTGCTCACAACTAGAGATATGAAAATAGGTAAGCATGCTGGTGGTGGTGGCAACCCTCATAAACTACGAACTCTGACTGAAGGCGAGAGTTTGAGATTGCTATGCAACAAAGCATTCCCTGAAACGGATAGCATCCCACCGGAGTTGGAGAATCTCGCAAGGGATGTTGTAGTGAAATGTGGTGGTTTGCCTTTGGCTGTGGTTGTGGTTGGTGGTTTATTATCTAGAAGACTTAAATCAAATGAGGAATGGTTGCGAGTGGCTGAAAATATCAGTTGGCACCTGCTGAATGAGCAAGATAGAATACGACGTATTTTGGCCCTGAGCTACAATGACTTGCCTTCTCACTTGAAATCATGCTTTCTCTACCTAGGTCTTTTCCCAGTTGGCATCAACATTCAGACCAAAAAGTTGATTCGCCTGTGGGTTGCAGAAGGTTTTTTACCACATGAAGGTGCAGAAACAGCAGAGGGTGTTGCTGAGAACTGCTTAAATGAGTTGATTGGCAGGTGCATGGTCCAAGTGGGCTCAGTAAGTTCGTTAGGCAAAGTTAAAACAATTCGCATCCATGATCTTCTCAGGGATATTTCCGTCTCCAAAGGGGAAGAGGAATATTTTCTTCGCATATATCTTGGCAGCCTGGAGAGTTCATCAGCATCTCAGGTAAACAGATCCCGCCGGCATGCCATACATTCTTGCTATGACCGTTATGACTTCTTGAAACACAATGCTCATCATTCACGTTCCATCCTCTTCTTCAATAGAGAATATAACGCAGATATAGTGAAGAAAATAAGGTTCAATGACCAGCAGTACAATATGAATTTCTTGCTAGAAAAGAAACTGAATTTAATTTTTAGCAAATTCAAGCTTCTCAGGGTTTTAGAATTAGATGGTGTTCGGGTTGTTCGTCTGCCGAATACAATAGGGGACCTTATTCAATTAAGGTATCTTGGACTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGGAACTTGCTGAATCTACAGACGCTTGATTTAAGATACTGTTGTTTTCTTAAGAGGATACCAAATGTGATTTGGAAGATGATTAATTTGAGGCATTTACTTCTGTATACTCCATTTGATTCTCCAGATAGCTGTCATCTAAGAACGGATACATTAACCAATTTACAAAGCCTGCCATATATAGAGGCTGGAAACTGGATAGGAGATGGGGGTCTAGAAAAAATGAAAAATCTCAGGCAATTGGGAATATATGAATTACCCGGAAAAGTGGTGAGGCCAGTGCTTTCTATTGCACAAGGATTACCTCACCTTCACTCACTGTCTCTTTCACTCCAATCAGAAGAAGATGAATTTCCAATCTTGATGCAGCTTTCTCAGTGCACTCATCTCCACAAGCTCTCTTTGAATGGGAGGATCAAAAAGCTACCTGACCCTCATGAATTCCCGCCAAACCTTATCAAACTAACTTTACATAACTCCTATTTACAGATGGAATCCATTGCCAAACTTGAGAGGTTGCCAAAACTGAAAATGCTTGTTTTGGGGAAAGGGGCATACAATAGGCGGGAATTGGTCTTCTCTGCTGATGGATTTTCACAGTTGCATATTCTAAGGCTTAATGTTCTGAAAGAATTGGAGGAGTGGACAGTTGAGGAAAGGGCAATACCAAGACTCGAGCACATCATTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGGCTCTTTCTTCTCTCAAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACAGAGGCTACGGACTAAAGACTTGCTGGAATTCAAAAATGCCCTTTCAATTGAATCAACTACAGACATTTTGGCAAATGATTCCAGCGGCAGGCACAATGTTGGCGGTTGA 2775 0.4227 MAEVAVSIVVEKLSELLVEQAVNAVSVLDGVRHDVETLNNDLRWMQCFLRDADAKQEENQLVRLLVSDIRDIAFEAEEVIEIYVYKVACQSRWDRVFRSLHLYEVSRKIDRIRSRIHDVSKKRETYGVVSERRGQNSINDRLRHWRQPWPYTEEECVIELEDDMEFLLNQLLAVDAGRVVSILGMGGLGKTTLAKKLYNHSKIHNHFDCRAWVYVSKEYRKRDILLGILKDADSFGGNEIERLERLREEDMMNRLHTILDEKRYLVVLDDIWSMEVWDSLESAFPRGKMGSKILLTTRDMKIGKHAGGGGNPHKLRTLTEGESLRLLCNKAFPETDSIPPELENLARDVVVKCGGLPLAVVVVGGLLSRRLKSNEEWLRVAENISWHLLNEQDRIRRILALSYNDLPSHLKSCFLYLGLFPVGINIQTKKLIRLWVAEGFLPHEGAETAEGVAENCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGEEEYFLRIYLGSLESSSASQVNRSRRHAIHSCYDRYDFLKHNAHHSRSILFFNREYNADIVKKIRFNDQQYNMNFLLEKKLNLIFSKFKLLRVLELDGVRVVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKRIPNVIWKMINLRHLLLYTPFDSPDSCHLRTDTLTNLQSLPYIEAGNWIGDGGLEKMKNLRQLGIYELPGKVVRPVLSIAQGLPHLHSLSLSLQSEEDEFPILMQLSQCTHLHKLSLNGRIKKLPDPHEFPPNLIKLTLHNSYLQMESIAKLERLPKLKMLVLGKGAYNRRELVFSADGFSQLHILRLNVLKELEEWTVEERAIPRLEHIIINRCEKLKKIPEGLKALSSLKEIKIIGMPVEFEQRLRTKDLLEFKNALSIESTTDILANDSSGRHNVGG 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00003 924 CDD RX-CC_like 2 121 IPR038005 -
Accr10g00003 924 FunFam Probable disease resistance protein At1g63360 403 492 - -
Accr10g00003 924 Gene3D - 145 307 IPR027417 -
Accr10g00003 924 Pfam NB-ARC domain 161 405 IPR002182 GO:0043531
Accr10g00003 924 SUPERFAMILY L domain-like 483 897 - -
Accr10g00003 924 PANTHER DISEASE RESISTANCE PROTEIN RP 40 860 IPR044974 GO:0006952
Accr10g00003 924 PRINTS Disease resistance protein signature 179 194 - -
Accr10g00003 924 PRINTS Disease resistance protein signature 353 367 - -
Accr10g00003 924 PRINTS Disease resistance protein signature 258 272 - -
Accr10g00003 924 PRINTS Disease resistance protein signature 627 643 - -
Accr10g00003 924 FunFam Probable disease resistance protein At1g61300 142 309 - -
Accr10g00003 924 Gene3D - 4 124 - -
Accr10g00003 924 Gene3D - 317 402 IPR042197 -
Accr10g00003 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 417 IPR027417 -
Accr10g00003 924 Gene3D - 403 493 IPR036388 -
Accr10g00003 924 Pfam Rx N-terminal domain 5 92 IPR041118 -
Accr10g00003 924 Gene3D Ribonuclease Inhibitor 554 907 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00003 Accr-Chr10 127084 129971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00003 178 836 WRKY Transcription Factor Family AT5G45050 22.940 8.85e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00003 - - gmx:100788025 1270.37