Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1914 ATGGCGCTGAAACGGGCTTCCCCCTCAGCTTCCTCTTCATCCGAGGAAGTAGAGGAAATTTCATCTGAATACGACGATAAACCTCCAAAACTTACACAACCCCACTCCACTGAAAAGAAGCCTGCTGCCAAAAAGCCTCCGCATGCGGCTCCAATCGCAAAGTCTCAAACAATATGTTTAGTGTCAGAATCTGAGACAGACTCTGATGCCGGATCTGACTCCAATGACGAGCGCCCCGGTGAGAATACGGATCTGATTATCAAGCCCACTGCCTCCGAGCCTAAAGCAAAGAAGTCAAAATCTCTGCCACCCGTTTCTCCGGACAAATCAGCGAACAAGCGACCGAGTGAAAACAATCGGCTGGTCACTGACTCGAAAAAGACGAAGAAGGGGAAGGATGCTTCCGGAAACAGTGAGATTCCCGCGGCAGAGGATGACAGTAAAAAAGCCGGGGATGAGTCCAAGAAGCTTTTTCAGAGACTCTGGAGTGAAGACGATGAGATTGCGATCCTCACGGGTTTAGCGGAATATGCAAGAGAAGCCCCGCTAAAGACTATTAATGGTTTTCACGATTTCATAAAGAAGTCCGTCCATGTGGATGTTTCAAATGAACAAGTGGCGAATAAGATTCGGACTTTGAGGAGAAAGTACGTGAACAATGCCCAAAGAGGGAAAAATGGTGAAGGCCCTAGTTTTTCTAAACCATACGATCAGAGAGTATTTGATTTGTCAAGGAAGATCTGGGCTAACGAAGGAGCCAATGGAGGAACAGACATTAAAAAGTCGAATGGGAAAGTGAAAAAAAATATGAAGGGTAAAATCGTTGCGGCTTCTAAGAAACCGGAGGCTGATCTGGTTTCAGATTCGAATAAAGCTAGAAAGGTTGACATTGATCCTAATGCAGGTGCACCGTTGACTTTAAGTGAAATGATTAGGTTCAACAGAAGTCTGGGCCTGTCAGCGTTGGATGATGATGCTTTTAAGAGGGGATATGATTTGATTGGAGCTTCCAAGAAGGCAGAGCTGGAGGACAGGCTGCCAATTCTTCAGGCAATTAGGATTCTGTTACTGTTAGGTCAAGTGAGGCACCATCACCTTGGTTTAGGGTGTGCTACTACTCTTGTTGGAGCTGTAAAAAGTGTAGGGGAATCAAAGCTGGGGAAAATTTACGTGGAATCAGATTGCAAGCTTTTGGTGGACGCTAGTTTAACTAAATCTCCTGGTCCAGATTGGAGAGCTCAACCTCTAGTGGAGGAAATTATAACGAGACTTGATTTGAATCATGACGTATCCTTGTCTTTTGTTCCTCGCTCTTGTAATTTGGCGGCAAACTGGTTAGCCTAA 1344 0.4539 MALKRASPSASSSSEEVEEISSEYDDKPPKLTQPHSTEKKPAAKKPPHAAPIAKSQTICLVSESETDSDAGSDSNDERPGENTDLIIKPTASEPKAKKSKSLPPVSPDKSANKRPSENNRLVTDSKKTKKGKDASGNSEIPAAEDDSKKAGDESKKLFQRLWSEDDEIAILTGLAEYAREAPLKTINGFHDFIKKSVHVDVSNEQVANKIRTLRRKYVNNAQRGKNGEGPSFSKPYDQRVFDLSRKIWANEGANGGTDIKKSNGKVKKNMKGKIVAASKKPEADLVSDSNKARKVDIDPNAGAPLTLSEMIRFNRSLGLSALDDDAFKRGYDLIGASKKAELEDRLPILQAIRILLLLGQVRHHHLGLGCATTLVGAVKSVGESKLGKIYVESDCKLLVDASLTKSPGPDWRAQPLVEEIITRLDLNHDVSLSFVPRSCNLAANWLA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1914 447 CDD RNase_H_like 388 447 IPR044730 -
Acco13g1914 447 MobiDBLite consensus disorder prediction 1 17 - -
Acco13g1914 447 Pfam Reverse transcriptase-like 377 447 IPR002156 GO:0003676|GO:0004523
Acco13g1914 447 PANTHER BNAANNG10740D PROTEIN-RELATED 10 346 IPR007592 GO:0006355
Acco13g1914 447 MobiDBLite consensus disorder prediction 23 45 - -
Acco13g1914 447 MobiDBLite consensus disorder prediction 113 134 - -
Acco13g1914 447 Pfam Protein of unknown function, DUF573 158 248 IPR007592 GO:0006355
Acco13g1914 447 MobiDBLite consensus disorder prediction 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1914 Acco-ChrAcco13 28545064 28548031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1914 62 363 GeBP Transcription Factor Family AT1G61730 30.990 1.33e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Acco13g1914 DUF573 3.1e-29 CL0123