Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1901 ATGCCTCTGTTTCTCAATAATGAGACCCAAGAAGTGCACCCAAAGGCACAAGAACCCTTCATCGCTCAAAAGAAAGATGACGACAAGCAGGAAGATGCACAGCCTCGAACAGTTATTGCTCTGTGGAAGGCCAACTTAGAACAACCAAAGCTACACCAGTCAGATCCTTCAGTGACTATTGCTGATCCTGCTACAAAAACACGCATTAAACTTGCACCTGCAAGTGAAAATGACAAGCAACAACTTAAGTGGTTCTCTGATGCATGCAAAGGAACTCCGCAGGAAAACCCAGCATTTTTGCAGAGTAACATTAGAACAGCTCCTCCCTCGGCGCCACCAGCTGCAGAAGATCCAGAGGTAGCTGCTGCTATCAGAGCATCCATGCAGTTTGCCATGCATGAAAGGCCACCCCCAGCAAATCCCCTGCCAAACTTTGGAGCAAGTTCTTCAAGTGGAGTAAATACGAACAAGCATGGTTCAATTGACATACCTAATCCGAATACAAGTGGTAGTTTGCCCACAAATGAAGGCGGACCGGGTAGCAACCCAAGTGAGCCCTTTCATATCAATAATAATGAGCCTGTTTCTCAAAGTTCCAGTGGTTTGGATTTGATTCCTTCAGCTCCTCCAATTGCGGACGAGAATCCAATAGATGGCCCCATTCATTATCCGTCAATTGATTTAAGCCCTGTCGATATATCATCTCCAGCTGCAGAGAACCCGCTTGAAGAAGAAAAGCATGCTGCTGGCAGCATTTCGTCTTGTGTGATCTGTTTAGATGCTCCGGCTGAGGGGGTATGCATACCCTGTGGCCACGTTGCTGGGTGCATGTCTTGCTTGAATGAGGTCAAAGCAAAGAAATGGGGTTGCCCAGTTTGTCGAGCGAAGATCGATCAGGTGATAAAGATATATCACGTTTAA 921 0.4658 MPLFLNNETQEVHPKAQEPFIAQKKDDDKQEDAQPRTVIALWKANLEQPKLHQSDPSVTIADPATKTRIKLAPASENDKQQLKWFSDACKGTPQENPAFLQSNIRTAPPSAPPAAEDPEVAAAIRASMQFAMHERPPPANPLPNFGASSSSGVNTNKHGSIDIPNPNTSGSLPTNEGGPGSNPSEPFHINNNEPVSQSSSGLDLIPSAPPIADENPIDGPIHYPSIDLSPVDISSPAAENPLEEEKHAAGSISSCVICLDAPAEGVCIPCGHVAGCMSCLNEVKAKKWGCPVCRAKIDQVIKIYHV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1901 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 305 IPR013083 -
Acco13g1901 306 SUPERFAMILY RING/U-box 254 300 - -
Acco13g1901 306 CDD RING-HC_XBAT35-like 255 304 - -
Acco13g1901 306 MobiDBLite consensus disorder prediction 133 225 - -
Acco13g1901 306 MobiDBLite consensus disorder prediction 1 33 - -
Acco13g1901 306 PANTHER OS05G0521000 PROTEIN 222 305 - -
Acco13g1901 306 SMART ring_2 255 293 IPR001841 -
Acco13g1901 306 MobiDBLite consensus disorder prediction 144 204 - -
Acco13g1901 306 Pfam Zinc finger, C3HC4 type (RING finger) 253 300 - -
Acco13g1901 306 ProSiteProfiles Zinc finger RING-type profile. 255 294 IPR001841 -
Acco13g1901 306 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1901 Acco-ChrAcco13 28383049 28385685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1901 249 303 C3H Transcription Factor Family AT3G06140 32.727 3.84e-07 49.3