LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g1855	ATGAGAAAAATCCCGAAACGCGAATGCGAAACCGTCAGCAGTAGCCGAGCCAATGACATCGATCGTCTCCGAGCTGTAAAGGCCGAACGGCTTAGGAATGCTCAAGTCGACGATGCTGGTCATGAGTCGAGCCAGGAGAACGAGCAGGACCCAGCATGTCGGAGGGCGATTCGGTCTCAGTACTTGACGCTCATGAATTTAATTAACGAGAAAAGGGATGATATGGCTAAGACGGATTCGGAAAGGTTTAATACCATCATGGAAGAAGTAGAGAGGTTACATGAGCACGTTCAGAAGCCCAGAGAGCAAGTTGCAGATGCTGAGGCGCTTCTTGACCTGGCTACCACTTTGGTCGGTTCTGTAAAGTCTCTACTTAGTGACGGTGTAACCCCTTCTGAGTTTGTTAGCTGCTTGATTAATGAGTTTGGACAATCCAGTAGGGATTTAAACAGTGAAGAGAATACCCAAAACTCAATTAACTGGAAAGAAGTGGGTTTGGCAGTATCACCAATTTTCATGAAGGTTCATGGCTGTTGTACCATGCTTGGTCCCATGGAAAATGAGATGAAGCAACGGAAGATAGGACAAAGAAAACGTGCAAGGCCAACAACTGCTATGGATAGGCCCGAAGAGATTGATGATGCAGCAGGAGAGGAAAAAACTGATACTGATAAGAATATGGCAACTATGTTTGAGATATTGAGGAAGAAGAAACATGTTCGGTTAGAGAGCCTAATGTTGAATAGGAAATCCTTTGCTCAGACCGTGGAAAACCTTTTTGCTCTATCATTCTTAGTTAAAGATGGCCGTGCTGAAATATCAGTGGATAAGAATGGTTCTCACTTAGTCTCACCAAGGAATGCCCCAGCATCCAACTCGGTTATGTCAAAAGAAGTTTCTTACAGCCATTTTGTCTTCAGATATGATTTTGAAGATTGGAAGCTAATGAAGGACATGGTGCCTGAGGGAGAGGAGCTAATGCCTCATAGGAATCAGTTCTGCACAGTGATTGACAGTCAGGTAGAGACGGTATGCGATTCCCAGCCACCATTGGTCACAACACCGATCAAGAAGCTAACCCGAAACCGAGGGCTTGTGCTGCAGGAAGATGTGGTGGAAGAATCTCCTGAATGTGATGAGGAAAATGCTTCCAAAGCTACTGGAATTCGTAGATGCAGGCTTAAGCTTTCTTAA	1194	0.4497	MRKIPKRECETVSSSRANDIDRLRAVKAERLRNAQVDDAGHESSQENEQDPACRRAIRSQYLTLMNLINEKRDDMAKTDSERFNTIMEEVERLHEHVQKPREQVADAEALLDLATTLVGSVKSLLSDGVTPSEFVSCLINEFGQSSRDLNSEENTQNSINWKEVGLAVSPIFMKVHGCCTMLGPMENEMKQRKIGQRKRARPTTAMDRPEEIDDAAGEEKTDTDKNMATMFEILRKKKHVRLESLMLNRKSFAQTVENLFALSFLVKDGRAEISVDKNGSHLVSPRNAPASNSVMSKEVSYSHFVFRYDFEDWKLMKDMVPEGEELMPHRNQFCTVIDSQVETVCDSQPPLVTTPIKKLTRNRGLVLQEDVVEESPECDEENASKATGIRRCRLKLS	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g1855	397	Pfam	Nse4 C-terminal	240	326	IPR014854	-
	Acco13g1855	397	MobiDBLite	consensus disorder prediction	33	52	-	-
	Acco13g1855	397	MobiDBLite	consensus disorder prediction	189	221	-	-
	Acco13g1855	397	MobiDBLite	consensus disorder prediction	200	221	-	-
	Acco13g1855	397	PANTHER	UNCHARACTERIZED	17	379	IPR027786	GO:0005634\|GO:0006281\|GO:0030915

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g1855	Acco-ChrAcco13	27062290	27064585	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g1855	1	397	Non-SMC Element family	AT1G51130	51.351	1.94e-134	389