Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1840 ATGTTTTCCTCTCGCCATCATCCGCTCAATATCTGTCTGAAAAGCGACCACTCTCCTTCAGCATTTTGTTCTCTCTCTAGTACTCGCTTGAACCTTTGTGGAGTCGGAAAGCTTCACCACGTAAGAGATTGTAGGTTTTCAGAGATGGAGTCTCTTGGTTTTGAGGATGACCTCCTGAATTTCTCATCTGACGTAGGTGAAGAAGATGATGAGGAAGATAAACCCAGGAAAGCCCTGTCTTCTCTTAGCCTTGAATGTAGTGGTCCAGCATCATTAAATGCTTTGGACGCAGAAGACCCAACCCATTCCTTTTCTGAATTTGCAGAAGAAGAGCTTGAATGGATTTCCAACAAAGATGCTTTCCCGGGGGTTGAAACATTTGTTGACACGCTCTCTATTCAACCAAACTTACCGAAGCCCCAAACGCCAGTCTCAACACTTGAATGCAGTGCAAGTAGTATCAACAGTAATAACAGTGCTAACAATGTCACCCTCTTAGATGGTTTTAATCACATTAATGTTCCTGTCCGAGCACGAAGCAAGCGTCGTAATAGGCAACCTCATGGTGTTGCTGACATATCCAGCCGGCAGTTTTGGTGGAACCAGCCAAGTAACACGATCACCAAACCTGAAGCAATGTTAACGATCTCAGTAATAGGGAGGAAATGCCAGCACTGTGGAGCAGAGAAAACTCCACAGTGGCGGGCAGGACCCCTGGGGCCAAAAACTCTTTGCAATGCATGTGGGGTTAGGTATAAGTCTGGGCGACTTTTGCCGGAATATCGCCCTGCAAGTAGCCCTACATTTTGTGGTGAGTTGCATTCAAATTCTCACAGGAAGGTAATCGAGATGAGAAAGCTAAAACAAATGGGAAGCCAGGGATGA 885 0.4576 MFSSRHHPLNICLKSDHSPSAFCSLSSTRLNLCGVGKLHHVRDCRFSEMESLGFEDDLLNFSSDVGEEDDEEDKPRKALSSLSLECSGPASLNALDAEDPTHSFSEFAEEELEWISNKDAFPGVETFVDTLSIQPNLPKPQTPVSTLECSASSINSNNSANNVTLLDGFNHINVPVRARSKRRNRQPHGVADISSRQFWWNQPSNTITKPEAMLTISVIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPASSPTFCGELHSNSHRKVIEMRKLKQMGSQG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1840 294 ProSiteProfiles GATA-type zinc finger domain profile. 217 253 IPR000679 GO:0006355|GO:0043565
Acco13g1840 294 FunFam GATA transcription factor 215 294 - -
Acco13g1840 294 CDD ZnF_GATA 222 269 IPR000679 GO:0006355|GO:0043565
Acco13g1840 294 ProSitePatterns GATA-type zinc finger domain. 223 248 IPR000679 GO:0006355|GO:0043565
Acco13g1840 294 PANTHER GATA TRANSCRIPTION FACTOR 55 289 - -
Acco13g1840 294 Pfam GATA zinc finger 223 257 IPR000679 GO:0006355|GO:0043565
Acco13g1840 294 Gene3D - 217 268 IPR013088 GO:0006355|GO:0008270
Acco13g1840 294 SMART GATA_3 217 267 IPR000679 GO:0006355|GO:0043565
Acco13g1840 294 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 220 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1840 Acco-ChrAcco13 26550783 26567035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1840 48 291 C2C2-Gata Transcription Factor Family AT3G24050 43.636 1.78e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco13g1840 GATA 1.5e-16 CL0167