LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g1829	ATGGCTTTGCAAGAATGCCCGGCAGCACAACTAGCCCAATTATTTGGCGGCAACACAACAAATGCCGCGGCCGCTGCCAGCTTCATCTGTGACAGATTCACCGCCGTCACCAACAAGTTCTCCGACACCACCTTCGCCGTGGACAGCACCTACCTCCTCAACTCTGCTTACCTCGTTTTTGCTATGCAACTTGGATTCGCCATGCTCTGTGCCGGATCCGTTCGTGCCAAGAACAGTATGAACATCATGCTTACCAATGTCCTTGATGCCGCCACCGGTGGTATCTTCTACTATCTCTTCGGTTTTGCTTTCGCCTTTGGAGCTCCCTCCAATGGTTTCATCGGCCGCCACTTTTTTGGTCTTAAAGACATCCCAGACACAAGCTTTGACTACAGCTACTTCCTTTATCAGTGGGCTTTTGCCATTGCCGCCGCCGGGATCACCAGCGGCTCTATCGCGGAGAGAACACAGTTTGTGGCCTATCTCATCTACTCATCTTTCTTAACAGGCTTTGTTTATCCCGTCGTGTCTCACTGGTTCTGGTCGAGTGACGGTTGGGCCAGTGCGACCAACTCATCCAACTTACTTTTTGGTACTGGAGTGATAGACTTCGCCGGCTCCGGTGTGGTTCACCTCGTCGGTGGTATTGCTGGTTTATGGGGTGCTCTCATCGAAGGTCCCAGAATTGGCAGATTCGATCACACAGGTCGACCCATAGCTCTTCGTGGACACAGTGCCACTCTCGTCGTTCTCGGAACTTTCTTGCTCTGGTATGGATGGTATGGATTCAATCCAGGTTCGTTCACAAAGATTCTCAGCGCTTACGAATCAGGAAGTTATTACGGCCAGTGGAGTGCGGTGGGCCGAACTGCCGTGACAACCACATTAGCTGGTTGCTCCGCTGCTTTAACTACACTCTTTGGCAAGCGGATTCTCTCCGGCCACTGGAACGTGACGGACGTCTGCAACGGTTTGCTTGGTGGGTTCGCTGCCATCACTGCTGGGTGCTCCGTCGTGGAGCCATGGGCTGCGATTATTTGTGGGGTCGTGGCGGCTGCGGTTTTGATCGGTTGCAACAAGCTGGCAGAGAAGATGAAGTACGATGATCCGCTGGAGGCGGCGCAACTGCACGGCGGCTGTGGCGCGTGGGGGATAATCTTTACGGCGTTATTTGCAAAGCGGGAGTATGTGGATCAAGTGTACCCGGGTAAAGCGGGTCGGCCACACGGGTTGTTCATGGGTGGTGGAGGGAGGCTATTGGGTGCTCACGTGATCCAGATTCTGGTGATAGTCGGGTGGGTCAGCGCCACCATGGGTACACTGTTCTTCATTCTTCATAAGCTCAAACTATTACGGATCTCGCCGGAGGACGAAATGGCGGGTATGGATCTGACCCGACATGGAGGATTTGCGTACGTGTACGAAGATGAATCACATAAACATGGGATTCAGTTGAAGAAAATCGAACCCAACGCTACTACTCCGACTCACCCAACGGAACTGTAA	1506	0.5299	MALQECPAAQLAQLFGGNTTNAAAAASFICDRFTAVTNKFSDTTFAVDSTYLLNSAYLVFAMQLGFAMLCAGSVRAKNSMNIMLTNVLDAATGGIFYYLFGFAFAFGAPSNGFIGRHFFGLKDIPDTSFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSSDGWASATNSSNLLFGTGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHTGRPIALRGHSATLVVLGTFLLWYGWYGFNPGSFTKILSAYESGSYYGQWSAVGRTAVTTTLAGCSAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGVVAAAVLIGCNKLAEKMKYDDPLEAAQLHGGCGAWGIIFTALFAKREYVDQVYPGKAGRPHGLFMGGGGRLLGAHVIQILVIVGWVSATMGTLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYEDESHKHGIQLKKIEPNATTPTHPTEL	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g1829	501	PANTHER	AMMONIUM TRANSPORTER	21	475	-	-
	Acco13g1829	501	NCBIfam	ammonium transporter	48	472	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Acco13g1829	501	FunFam	Ammonium transporter	29	487	-	-
	Acco13g1829	501	SUPERFAMILY	Ammonium transporter	47	453	-	-
	Acco13g1829	501	Gene3D	Ammonium transporter AmtB like domains	27	492	IPR029020	-
	Acco13g1829	501	Pfam	Ammonium Transporter Family	52	472	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Acco13g1829	501	ProSitePatterns	Ammonium transporters signature.	203	228	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g1829	Acco-ChrAcco13	26052975	26054480	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g1829	4	501	Inorganic Solute Cotransporters	AT4G13510	79.010	0.0	807