Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1807 ATGTCCTTTTCTTTGCATACCTCCCTTCCATGCATCTTCCTTCGAGGGCCGACAGCTTTATTATTTATTACGCAATTTTATCTATTTTTGTTGTTGGTGGTACTGCTGAAACAAGGGAATGGTGAGAACCAGCAGGTGCCTCATCATCAAACTCTTCCATTATTCCGTCTTTATTATAATGAATCCGCCGCATTAATGGTTGAGTTTCCCACTATTCCTGCTCTTCAAGGAGTATCTCTCCATGTCCTTTCCATAGACTATGAATCCCACCGCTTATCCACAGAGGATCCAGAAGGTTGTCTTCCCAGACTCTTTCTACAACGCCATCTCTACAATTCATCCAATATTCATCCTTTAGAGTATTATTTTTTTGACAACACCATGACCGAAATTGTCACTTACTTCGATTGTTCTTCGGCTTGGTCAAGATATGATGAGTCCAACTACTGCCCGATTGTTGCTCTTGGCTCCGATGATAGCGTCCTGTCCAGGGACCTAGTTTCCTGCAGCATGATATCACGGTTACCATCACCAATAGCCGCTCACGATCTTCAGTACTGGAACTGGTTACCACTCAAATGGCCGTTCCAACCAGAAGATGAAAAGCACAAAGCCAGCAAGATGCTCAGAATTCTTTCATCAACTACAGGTTCCATTGTTCTTGTTTTGCTGTTGGTTGTGGGCTTCTACATATGCCGCTACTTCAAGAAGAAAGGAGATGATCAAGTGAGACTAGAAACGTTTTTGGCGGATTACGAGGCGGTTAAACCCACCAGATTCTCTTATGCAGATATCAAAAGAATCACAGGCCGATTTGAGGATAAATTAGGTGAAGGTGCGCATGGAACAGTGTTCAAAGGTAAGCTATCTTCTGAAATTCAAGTGGCTGTCAAAGTACTCAATAATTCAGATCATGATGGAAAAGACTTCATTAATGAAATGGGCACGATGGGCAAAATTCATCACATCAATGTTGTTCGCTTGTTGGGCTTCTGTGCTGATCGTTGTCACCGAGCCCTTGTTTATGATTTTTTCCCTAATGGTTCCCTCCAAAAGTTCATATCTTCCCCTGACAACAAGGAAAGTTTCATGGGATGGTCAAAACTCCAACAAATTGCTCTTGCCATAGCCAAAGGTATTGAATATCTTCACCAAGGTTGTGATTATAGAATTCTTCATTTTGATATCAATCCTCGCAATGTGTTGTTAGACGGCAATTTTACTCCCAAAATTTCTGATTTTGGTCTAGCAAAATTGTGTTCTAAAAATCAAAGTACAGTGTCAATGACAGCAGCAAGAGGAACCTTAGGATATATTGCACCTGAAGTTTTCTCTCAAAATTTTGGAAATGTGTCATACAAATCAGATATTTATAGTTATGGAATGCTACTTTTGGAAATGGTTGGTGGAAGGAAAAATGTTGATACAAATAAAGAAACTTTTCAAGTTCTTTATCTAGAATGGATCCATAATTTGATTGAAGGAGGAGACGTAAGTATTTATATAGAAGATGAAGTTGACATTAAAATTGCTAAAAAGCTAGCAATTGTAGGACTTTGGTGCATTCAGTGGCATTCAGTAAATCGTCCATCCATGAAAACATTGATACAAATGCTGGAAGGAGAAGTAGATAAATTGAAGGTGCCTCTCAATCCATTTGATTTTACTGCCTCAACCAGCTCAAGTATCACTTTTCCTACAAAACATTTGAATTTAGGGTTAGATGTGATTCATGAATTAGAGTAA 1746 0.3929 MSFSLHTSLPCIFLRGPTALLFITQFYLFLLLVVLLKQGNGENQQVPHHQTLPLFRLYYNESAALMVEFPTIPALQGVSLHVLSIDYESHRLSTEDPEGCLPRLFLQRHLYNSSNIHPLEYYFFDNTMTEIVTYFDCSSAWSRYDESNYCPIVALGSDDSVLSRDLVSCSMISRLPSPIAAHDLQYWNWLPLKWPFQPEDEKHKASKMLRILSSTTGSIVLVLLLVVGFYICRYFKKKGDDQVRLETFLADYEAVKPTRFSYADIKRITGRFEDKLGEGAHGTVFKGKLSSEIQVAVKVLNNSDHDGKDFINEMGTMGKIHHINVVRLLGFCADRCHRALVYDFFPNGSLQKFISSPDNKESFMGWSKLQQIALAIAKGIEYLHQGCDYRILHFDINPRNVLLDGNFTPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSQNFGNVSYKSDIYSYGMLLLEMVGGRKNVDTNKETFQVLYLEWIHNLIEGGDVSIYIEDEVDIKIAKKLAIVGLWCIQWHSVNRPSMKTLIQMLEGEVDKLKVPLNPFDFTASTSSSITFPTKHLNLGLDVIHELE 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1807 581 SUPERFAMILY Protein kinase-like (PK-like) 253 540 IPR011009 -
Acco13g1807 581 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Acco13g1807 581 ProSiteProfiles Protein kinase domain profile. 270 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1807 581 FunFam PR5-like receptor kinase 345 551 - -
Acco13g1807 581 PANTHER RUST RESISTANCE KINASE LR10-RELATED 244 557 IPR045874 GO:0004672
Acco13g1807 581 FunFam serine/threonine-protein kinase PBS1-like 240 344 - -
Acco13g1807 581 Gene3D Phosphorylase Kinase; domain 1 246 344 - -
Acco13g1807 581 Pfam Protein tyrosine and serine/threonine kinase 272 537 IPR001245 GO:0004672|GO:0006468
Acco13g1807 581 Gene3D Transferase(Phosphotransferase) domain 1 345 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1807 Acco-ChrAcco13 25388844 25390884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1807 259 556 Receptor kinase-like Gene Family AT5G38280 48.366 5.80e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco13g1807 PK_Tyr_Ser-Thr 8.4e-45 CL0016