Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1749 ATGGCCGACATTGTAATTTCTATTGGGGCTAAAGTTGCTGAAGGTTTTGTGAAACCAACGATTCATCAAGTACAATATTTCTTTTGTGTTAGAAAAGTAGTTAAAAATCTTGGCAATGAAAAGAATGAGCTGATATCAGAAAGGGATCGTATCCAAAGTCTCGTGGAGCAAGCAAAGGAGAGAACTGAAATAATTGAAAATTCTGTAGAGAAGTGGTTGGATGATGTGAAAAATCTGCTGTTAGAAGTGGAGCGACTGGAACATGAAATGAAAGAAAACCATTGCTGTCAAAGACAGTTTCCTAACTTGAGAAGATATTGTCTATGTAAGGAAATGATGAAGAAGATAAAGAGAGTTGCATATTTAAAAAATAATTGCAAGTTTGAGCCTTTTTCTCAGCTGGGTCCTCTTCCAGGCATTGAATACATCACTTCCCGAAATTTTACTTATTTTGAATCTACAAAAGAAGCTTACAACCAGATCATGGAGGCAATACAAGATGACGACACTTGCATGATTGGGTTGTATGGCATGGGAGGATCTGGGAAAACAAACCTTGTTAAAGAAGTTGGTAGAAAAGCTTTGCAATTGAATTTGTGTGATCGGGTTATTTTTGTTACTGTGTCTCAAACACCAAATGTTAGAGGTATTCAAGGAAAAATTGCAGATATGCTTTGCATGACACTGAAAGAAGAAACTGAAGAGGGAAGAGCACAAAGGTTATGGTTGAGAATAAAAGAAGAGAAACGAGTTCTTCTAATTGTTGATGATGTATGGGCGAAGTTTAATTTGGAGAGTATAGGCTTTCTCTTCAATGATAACAACATACTCAACTTGAAGGTCCTTTTGACAACACGTCTCCGACAAGTATGTGCCTCAATGGAGTGTCAAAGAGAGATCATACTAAATCTCTTATCTGAAGGGGAAGCCTGGAGCTTGTTTCAAAAGCATGCAAGAATCTCATCCAATCTCTTAAAAATTGCTCGAGAAGTTTCTAATGAATCCAAAGGGTTACCTATTGCAATAGAAGCTGTGGCGTGCTCTTTGAAAGGAAAAGGTGATGATGAGTGGAAGGTGGCATTGGAGAGCTTAAGGAGTTCGGAACCTTTTGATGATAATGAGGGAGAAGGAGTAAGATGTGCTTACAATTGCCTCAAATTAAGTTATGATTATTTGAGAAATAAGGAAGCTGAGATGCTCTTGTTATTGTGTTCTCTGTTTCCTGAAGACCATGAAATCTTTATAGAGGATTTGATTCAATATGGAGTGGGGCTAGGTATATGCGGAGCCTTCAATTCCTTTGACTTAGCAAGGAGTCGGATCAGAGCAGGCATAAACAAACTTGTAGATTCTTGTCTGCTATTTCATTCTAGGCAAAGTGAACATTATGTGAGGATGCATGACATGGTTCGTGATGTAGCTTTGTGGATAGCTTCCAAATCGGTGCATCACAAAATTCTGGTGGATCTTACAAAACATCTTAATAGCTTGGCAGAGAATGGAGCTATGAAAGATTCTTTTGCAGTATCTTCATGGTGCAAGGAAACTGATACAAGTTTTCATCCTTTGGATGCTCCGAAGCTTGAGATTCTTTTGATAAACACTATGCAAGAGAATTCTCTGAATTTTATGTTGGCATCTTCTGAAAGAGTGAAGGAGCTCAAGGTTATGGCCATGATCAATTCATTTTATCGACCTCCCTTATTATTGCCTCAATCAACCCGTTGCTTGACTAATCTTCGAACTTTGCGTTTGAGAGGATGGGATTTAGGTGATATGTCTTTCATTGTAAGCCTAACAAGACTAGAGATTCTTGACTTGTCCAATTGTTACTTCAAGGATTTACCTAAAGGAATGGACAAACTCAGCAAATTGAAGTTGTTGGATTTGTCTCACTATGAAATTCCTGAAAATTTAAATTATGAAGCAATAGGAAGTTGTTTACAACTAGAAGAGTTATATGCGTTTGGATATACTCAAAGATGTCATCGTCAACACATAGAGGGTATTGTTACTCTCCCAAATCTGCAGAGGTTTGTAATCCGTCTCGGGCAGTTTGATACTCTTGACAATGAAGAAAGTGTCAGGGTTTTACACCTACTTGATTTCAGTATGTCCAACATAGGTGCATCTAAGAAAAATCTTCTTCAAAGAGCAGAAGTTGTCTGTTTAAAAAATCTTCTTGGAGATTGTAAGAATATCATCCCAGACATGATTCAAGTTGTGGGAAACATGGCTGAATTGACCAAGCTTAGTCTTCAATCTTGTAAAGATATAGACTGCCTCATTGATACAACTTACCATTATGCTGCCTCATTTCAAGTAGATGTATTGTTGCCCAAGTTGATTGAGTTGAAGCTATCTGAGATGGACAAGATGACAGAAGTGTGTCGAGGCCCTCCCCTCCTAGTACTCGGTTTCTTCAAGAAATTAGAAAGACTTTTCATACGAAACTGTAAGCAACTTTACAACATATTTCCAGGGACATGTAACTTGTGCAACCTTAAGATCCTGAAAATATGGAACCGCCATTCCTCAGCAATTGCATCACTCTTCTCAATGTCTGTTGCCAGAAGTATGGAACAATTAGAAGAGCTACGAATACAAGGTTGTGACCAATTGAAGCATATAATTGCAGGAGAAAGAGGGGGTGGTACTAATACAAGAGAAAATTCTCATTCGATGTTCCATAAATTAAAAAAACTCTCCATTTGTGACTGTCCCAGGTTGGAATTTATATTTCCATTATCATTTGTCAAAAATGGACTTTTGCAGCTGCAAGAGATTGAAATAGAATCTGCTTCTAAACTGAAGTATGTATTTGGTCAACATGACTATGAGGAAAACGCCTCTTGTCAAAACCAGGTCCAAATCATGCTTCCTCCTCTGAAGATATTCTATCTATACAAGGTTGAAAATCTTCAAGGTATGTGTCCAGAAAGCTACCATCTGGGGTTCCCATCATTAGAAGAGCTAGACTGCCAGCAATGTCCAAAATTAACTGCATCATGTATCAGTGTAACTATTAGTTCAGAACAGAGACCTATGAACAATGGGGTTGCGCTTGACGATGATCGACAAAATTGCTTGACCTCGAATTTACAACAACTATTGTTAGGAGGATTATATGACTTAAGGTTCATATGGTCGGGTACTACTTCAACCCAAGTTTTGAGTTTCCAGTTCCTTCAATGTTTAAAGGTAGATAGCTGTGCAAATCTAAAGTCAATCTTCTCCACGGCCATCAAGAGAAGCCTACCAGAGTTGACACTCCTAAGTATATGCAACTGTGAGGAACTAGAAGAAATTATGGCAGAGAATGTAGAACCTGCAAGTCTATCCAATATAGAAGTGTGCTTTCCAAAACTGAGTGAGCTGAGGATTGAGAAGTGCAACAAGTTGAAAAGCCTTTTCTCTGTTGCTATGTTCAAAATGCTTCCACAACTAAGCTTTATACATATATCATGTGCCGCTCAGTTAGAGGAGGCTTTTCGATGTAGTGGTCAAGACAATACAGATTATGGAGACCAAATCATGCTTCCAGAGTTGACAAAAATAGAACTGCAAAAGTTGCCAAGTTTTGGGAACATCTTCAAAGGATTCAACTTTCAAGCACCAAAAGTTCAACAGCTCTATATAAATAAATGCTCAAACTTTTCCCCAAGTGTAAGAAGTGGAACTCAAGTGGATACTTTTCAGAACACAACAGAGAGGAGGAGGCAAGTATTTTGGCTAATTGTTGCAGCCTACAATTTGGAAGCTTTCCTAAATTTGGAAGTTTTGCATGTGACCAAGAGTAGGGAAGAAGGAATTTTCCAAATCCAAGCTTCAGGAGAACTCAGTATTAATAGTGAATTGAAGCCATTGAACTCAAATTTGGGTTATTTGACATTGTATGATCTTCCTGAGCTGAAATTTATTTGGAATGGCTTCTCAAAATTTTTGAGCCTTGATAAACTGACACATGTATCAATTCAGAAGTGTCCAAAAGAGAGACAAATATTCTGGTTGATTACTACAGCCAAAGAACAATGGAAGCAAAGGCATCATGCAACTTTGCAAGCCTCTCTAAACTTGGAAGTCCTTCATTTGAGTATGTGTGAAGCAGAAGGCATTTTCCAAGGTGAAGGAGAACTTGGTAGTAATAGTGAATTCAAGCCATTGAACTCCAAATTGGAGCGTCTAAATTTATGTGATCTACCTGAGCTGAGATTCATCTGGAGAGGGCTCACGAACTTTCTGAGCCTTGAGAAACTCACACTAGTATCAATCTCTAATTGCCCAAAATTAAAAACTATATACTCCCCAAGCATTGTTAGATGGCTACCTAAGCTACATTCAATGGAGCTTTCAAACTGTGCTGAATTAGTGGAAATCATGTGTTTGAATTCCATGAACGCACAACTCAATTACCCTTATGCTTGTCACCAACAAGAAGTGTGCTTCCCACAACTATGCAAGATTAAAGTTGAGCAGTGCAACAAGCTTAAATGCCTTTTCTATGATTTTAAGGCTTATCATTTTCCTGAGTTGAAGTCTCGAGATCAAGGAGTGTTGTCAAATAGAACAGTCTTGGATTGTCCCAAATATAATTGCACCTACACTAAAGCAAGCCCTTCTTACCAGCATACTATACCACAGGGAGCTTGGGATGCCGGGTTTCGCAGAGTTATTCTGGAAACAAACTCTCTGCAAATTATGAGTATGTTTGAGAAAGATGTGCAGGAACGGTACTTTGATGCTGAGGAGGAACTTGTGCACCAAATACATAGCATGCTAGACTGGAAGTGGAAGGTCCAGGTGGTGCATCGCCGGCCGGAGGGCAATAAGGTGGCGGATTTGCTTGCCAATTTAGCTTTGCAAGCATGGCCTGGTTACCACTTCTTTCACCATCCCCCAAAACAAGTTGAGGAGCTTGTTAGAGAGGAAGCTGGGAAGAAGCCATTGTTAATTTAA 4956 0.388 MADIVISIGAKVAEGFVKPTIHQVQYFFCVRKVVKNLGNEKNELISERDRIQSLVEQAKERTEIIENSVEKWLDDVKNLLLEVERLEHEMKENHCCQRQFPNLRRYCLCKEMMKKIKRVAYLKNNCKFEPFSQLGPLPGIEYITSRNFTYFESTKEAYNQIMEAIQDDDTCMIGLYGMGGSGKTNLVKEVGRKALQLNLCDRVIFVTVSQTPNVRGIQGKIADMLCMTLKEETEEGRAQRLWLRIKEEKRVLLIVDDVWAKFNLESIGFLFNDNNILNLKVLLTTRLRQVCASMECQREIILNLLSEGEAWSLFQKHARISSNLLKIAREVSNESKGLPIAIEAVACSLKGKGDDEWKVALESLRSSEPFDDNEGEGVRCAYNCLKLSYDYLRNKEAEMLLLLCSLFPEDHEIFIEDLIQYGVGLGICGAFNSFDLARSRIRAGINKLVDSCLLFHSRQSEHYVRMHDMVRDVALWIASKSVHHKILVDLTKHLNSLAENGAMKDSFAVSSWCKETDTSFHPLDAPKLEILLINTMQENSLNFMLASSERVKELKVMAMINSFYRPPLLLPQSTRCLTNLRTLRLRGWDLGDMSFIVSLTRLEILDLSNCYFKDLPKGMDKLSKLKLLDLSHYEIPENLNYEAIGSCLQLEELYAFGYTQRCHRQHIEGIVTLPNLQRFVIRLGQFDTLDNEESVRVLHLLDFSMSNIGASKKNLLQRAEVVCLKNLLGDCKNIIPDMIQVVGNMAELTKLSLQSCKDIDCLIDTTYHYAASFQVDVLLPKLIELKLSEMDKMTEVCRGPPLLVLGFFKKLERLFIRNCKQLYNIFPGTCNLCNLKILKIWNRHSSAIASLFSMSVARSMEQLEELRIQGCDQLKHIIAGERGGGTNTRENSHSMFHKLKKLSICDCPRLEFIFPLSFVKNGLLQLQEIEIESASKLKYVFGQHDYEENASCQNQVQIMLPPLKIFYLYKVENLQGMCPESYHLGFPSLEELDCQQCPKLTASCISVTISSEQRPMNNGVALDDDRQNCLTSNLQQLLLGGLYDLRFIWSGTTSTQVLSFQFLQCLKVDSCANLKSIFSTAIKRSLPELTLLSICNCEELEEIMAENVEPASLSNIEVCFPKLSELRIEKCNKLKSLFSVAMFKMLPQLSFIHISCAAQLEEAFRCSGQDNTDYGDQIMLPELTKIELQKLPSFGNIFKGFNFQAPKVQQLYINKCSNFSPSVRSGTQVDTFQNTTERRRQVFWLIVAAYNLEAFLNLEVLHVTKSREEGIFQIQASGELSINSELKPLNSNLGYLTLYDLPELKFIWNGFSKFLSLDKLTHVSIQKCPKERQIFWLITTAKEQWKQRHHATLQASLNLEVLHLSMCEAEGIFQGEGELGSNSEFKPLNSKLERLNLCDLPELRFIWRGLTNFLSLEKLTLVSISNCPKLKTIYSPSIVRWLPKLHSMELSNCAELVEIMCLNSMNAQLNYPYACHQQEVCFPQLCKIKVEQCNKLKCLFYDFKAYHFPELKSRDQGVLSNRTVLDCPKYNCTYTKASPSYQHTIPQGAWDAGFRRVILETNSLQIMSMFEKDVQERYFDAEEELVHQIHSMLDWKWKVQVVHRRPEGNKVADLLANLALQAWPGYHFFHHPPKQVEELVREEAGKKPLLI 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1749 1651 Pfam NB-ARC domain 160 390 IPR002182 GO:0043531
Acco13g1749 1651 Gene3D Ribonuclease Inhibitor 950 1172 IPR032675 -
Acco13g1749 1651 Gene3D Ribonuclease Inhibitor 1251 1528 IPR032675 -
Acco13g1749 1651 Gene3D Ribonuclease Inhibitor 824 944 IPR032675 -
Acco13g1749 1651 Gene3D - 388 475 IPR036388 -
Acco13g1749 1651 SUPERFAMILY RNI-like 1255 1460 - -
Acco13g1749 1651 Gene3D - 304 387 IPR042197 -
Acco13g1749 1651 Pfam Reverse transcriptase-like 1548 1619 IPR002156 GO:0003676|GO:0004523
Acco13g1749 1651 CDD RNase_H_like 1549 1617 IPR044730 -
Acco13g1749 1651 PRINTS Disease resistance protein signature 172 187 - -
Acco13g1749 1651 PRINTS Disease resistance protein signature 335 349 - -
Acco13g1749 1651 PRINTS Disease resistance protein signature 245 259 - -
Acco13g1749 1651 PRINTS Disease resistance protein signature 597 613 - -
Acco13g1749 1651 Gene3D - 142 302 IPR027417 -
Acco13g1749 1651 Gene3D Ribonuclease Inhibitor 527 796 IPR032675 -
Acco13g1749 1651 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1357 1513 - -
Acco13g1749 1651 Coils Coil 34 93 - -
Acco13g1749 1651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 401 IPR027417 -
Acco13g1749 1651 SUPERFAMILY L domain-like 465 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1749 Acco-ChrAcco13 23891839 23899255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1749 169 657 WRKY Transcription Factor Family AT5G45050 23.004 2.29e-08 57.4