Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1726 ATGGCGTGCAATGGATTATCAACAATCTCAGGAAGCGATTCTCGCTTCTTCAGCCTTTCAAAACCACCAATTCCTTCCCTCAAATCCTTGAAATTTTCCTCAATTCGAGTTCCGTTTTCTCGTTCCTCTTCGTTTAAACCGAGAGCTCTGTCTGTCGCCGAGCCCTACTTCTCGTCGCCGTCTTCCTCCGAGCCCTCTAAATTGAGCTTCTACGAGCTTCTCGGTATCCCCGAATCCGGATCCTTACTCGAAATCAAGCAAGCCTACAAGCAGCTCGCGCGCAAGTACCACCCGGATGTATCTCCGCCGGATCGGACCGATGAGTTCACCAAGATATTCATTCTGGTTCATGAAGCCTATGAGACCTTGTCTGATCCTCAACGGAGAGCTATGTACGATAGAGCCATTCACTTGGGCTACTCTGCTGGCTACGACGATGAGATTGCTGAAATAAAGAAAGAATGGAGAGCTTGTTGGGAGGTTCAGCTAGCAGGGCTGAATAACAGAACTTACAAGTATGGCAATAGATCTCAGTCATGGGCTTCTCGAGTCCGCCGGATGCATAATGAAGCTGGAATTGACAATTAG 588 0.483 MACNGLSTISGSDSRFFSLSKPPIPSLKSLKFSSIRVPFSRSSSFKPRALSVAEPYFSSPSSSEPSKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRTDEFTKIFILVHEAYETLSDPQRRAMYDRAIHLGYSAGYDDEIAEIKKEWRACWEVQLAGLNNRTYKYGNRSQSWASRVRRMHNEAGIDN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1726 195 Gene3D DnaJ domain 61 156 IPR036869 -
Acco13g1726 195 CDD DnaJ 70 125 IPR001623 -
Acco13g1726 195 Pfam DnaJ domain 70 133 IPR001623 -
Acco13g1726 195 SMART dnaj_3 68 128 IPR001623 -
Acco13g1726 195 PRINTS DnaJ domain signature 71 89 IPR001623 -
Acco13g1726 195 PRINTS DnaJ domain signature 89 104 IPR001623 -
Acco13g1726 195 PRINTS DnaJ domain signature 128 147 IPR001623 -
Acco13g1726 195 PRINTS DnaJ domain signature 108 128 IPR001623 -
Acco13g1726 195 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 59 190 - -
Acco13g1726 195 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Acco13g1726 195 SUPERFAMILY Chaperone J-domain 67 159 IPR036869 -
Acco13g1726 195 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1726 Acco-ChrAcco13 23342610 23344250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1726 61 133 C2H2 Transcription Factor Family AT1G74250 43.750 6.52e-09 53.1