Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1707 ATGGCATCTGATTCGAATGGACCTGCATCCGATAACACACTCAAGGCTATCCGTTACCAGCGTGGTTCGCTTCTGCTTCTTGATCAGAGAAAGCTCCCTCTAGAAAGTGTTTACTTGGACATTCAGAACTCAACTGATGGCTGGAATGCCATAAAGGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATCGCAGCAGCACTTTCTTTGGCTGTTGAAGTTTTCAATCTAGAGGCATTTGATGGGTCACCCGGTGATGCGGCTTCCTTCCTTGGACAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTTTCAGATGCTGCAACCAAACTCAAAGAAGTTATATCTAAGGCTGTTGCTTCTACTACAGAGGCCAAGGGTGTTTTCCAGGTGTATGTAGAAGCTGCTGAGATTATGCTCGAGGATGATGTTGCCTCAAATAGAGCAATTGGTTCTTATGGAGCTAGTATTATTCAACAACAAAGGGGGAAAAGAAAGCTTTCTGTTTTGACCCATTGCAACACAGGAAGTCTTGCCACTGCTGGATATGGGACTGCTCTGGGTGTAATTCGTGCACTTCATAGTGAAGGGGTTTTAGAAAGGGCCTATTGCACAGAAACACGCCCATTCAGTCAGGGATCTAGGCTCACGGCCTATGAGTTGGTGCATGAACACATACCTGGAACTCTTATAGCAGATTCTGCAGCAGCTGCACTGATGAAAGCTGGACGAGTAGATGCTGTTGTTGTTGGGGCAGACCGTGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACCTATAGCATTGCCTTATGCGCCAAGTTCCATAATATACCCTTTTATGTGGCTGCCCCTTTGACTTCCATTGATCTATCACTTTCTTCCGGACAAGAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATGCACGTGGAGGACTTGGAGAGGCTGTTGCAGCCCCAGGAATTTCTGTGTGGAACCCTGCTTTTGATGTCACACCGGCTGGCCTGATTTCCGGTATCATCACAGAGAAGGGTGTCATTACCAAGACAAGAGATGATGATACATTCGACATAAAAGCTTTTGCGCAGAAGACTGGTCATACCAACAGTTGA 1137 0.4617 MASDSNGPASDNTLKAIRYQRGSLLLLDQRKLPLESVYLDIQNSTDGWNAIKDMVVRGAPAIAIAAALSLAVEVFNLEAFDGSPGDAASFLGQKLDYLVSSRPTAVNLSDAATKLKEVISKAVASTTEAKGVFQVYVEAAEIMLEDDVASNRAIGSYGASIIQQQRGKRKLSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCTETRPFSQGSRLTAYELVHEHIPGTLIADSAAAALMKAGRVDAVVVGADRVASNGDTANKIGTYSIALCAKFHNIPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNARGGLGEAVAAPGISVWNPAFDVTPAGLISGIITEKGVITKTRDDDTFDIKAFAQKTGHTNS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1707 378 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 358 IPR037171 -
Acco13g1707 378 Pfam Initiation factor 2 subunit family 56 356 IPR000649 GO:0044237
Acco13g1707 378 FunFam Methylthioribose-1-phosphate isomerase 169 367 - -
Acco13g1707 378 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 366 IPR005251 -
Acco13g1707 378 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 15 357 IPR005251 -
Acco13g1707 378 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 42 357 IPR011559 GO:0044249
Acco13g1707 378 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 371 - -
Acco13g1707 378 Gene3D - 12 203 IPR027363 -
Acco13g1707 378 Gene3D - 204 369 IPR042529 -
Acco13g1707 378 FunFam Methylthioribose-1-phosphate isomerase 12 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1707 Acco-ChrAcco13 22764308 22770598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1707 53 377 Eukaryotic Initiation Factors Gene Family AT2G05830 77.982 1.37e-176 492