Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1705 ATGTGTATGTCGAAGCCAAGTAGGAAAGCCCCGCTCACAATTTCGCAATTTTCGTGGTTTATTGCTTCGAAAGCGATTGTAGTTGACAATCAAATGGACAAGTGTCCTTTGCCATTAAAAAGCAACACACATGAAAATAAGAAGAGGGTGTTATCTGGGAAGGAAGCGTTGGCGAAGCTTTTAAGATGGCATTTTGGTTACCCTGATTTTAGGGGCAATCAATTGGAGGCTATTCAAGCTGTACTTTCCGGAAGAGATTGTTTTTGTCTTATGCCAACAGGAGGAGGGAAGTCATTATGTTATCAGATCCCTGCATTAGCTAAAACAGGAATAGTTCTTGTTGTTTGTCCTTTAATAGCTTTGATGGAAAACCAAGTGATGTCATTAAAAGAGAAAGGAATTGCTGCAGAATTTCTCTCCTCAACCCAAACAGCTGATGCAAAAAATAAGATTTATGAGAACCTTGATTCTGCAAAGCCTTCTATAAGGCTGCTATATGTCACTCCAGAATTGATAGCAACACAGGGTTTTATGTTGAAGCTGAAAAGAATGTATGCTAAAGGGTTGTTGGATCTCGTTGCCATAGATGAGGCACATTGCATCTCAACTTGGGGCCATGATTTCAGGCCTAGCTACCGTAAGCTTTCATCATTGAGGGACCACTTTTTGGATGTGCCAGTGTTAGCTCTGACTGCTACAGCTAATCCTAAGGTACAGAAGGATGTGGTAAAGTCATTGAACATGCAAAATCCATTAATACTAAAGTCATCTTTTAATCGTCCTAATATATACTATGAAGTTCGATACAAAGATCTCTTGGAAGATGCTTATAGTGATCTATCCAATATGCTAAAATCTAAGGGAGATGTCTGTGCAATTGTTTACTGCCTTGAGCGTTCAACATGTGATGACCTGGCAGCTCTTCTATTACAAAATGGCATTTCTTGTGCTGCCTATCATGCAGGGTTGAATAATAAATTGCGGACTTCTGTGTTGGATAATTGGATTTCATCTAAGATACAAGTTGTTGTTGCCACTGTTGCTTTTGGCTGTACTATTGCGCCACAATTACTGAGCTTTTGGTGTTCATTTAGAATGGGCATTGACAGAAAGGATGTCAGAATTGTGTGCCACTTTAATATTCCAAAGTCAATGGAGGCATTCTATCAGGAATCAGGCAGGGCAGGTCGTGATCAGTTGCCATCTACAAGTTTTTTGTACTATGGAGTAGATGATCGGAAGAGAATGGAATTTATATTGAGCAAATCTGGAAGCAATAAGTCACAGTCATCAAGCTCTCAAGAAGAATCATCTGAAAGGTCCATAGCTGACTTTAATCAGATGGTTGAATACTGCGAAGGATCTGGATGCCGAAGGAAAAAGATTCTTGAAAGTTTTGGAGAGAAGGTGACTGCATCACTATGTGCAAAATCATGTGATGCCTGCAGACATCCAAACTTAATTGCTAGATATTTGGAGGATGTAATAGCTGCCCGTTCTTTACACCAGAAATATAATTCCTCTCGAGTCATTATCAGCAGTTCAACAGGTGGAGTTGATGAAGAACAAGTATCTGAATTCTGGAATCTTGATGAAGAAGCCAGTGGATCAGATGAGGATATATCTGATTCAGATGATGGTACTGAGATTGTCAACAACCTAACCGGACTAAAATCCAAATCCAGATTGAGAGTGGAAGCAAAAATTGCTTTTTTGCAACGTGCTGAAGAAAATTTCTATCAAAAAGAAAATGCTGATAAACAGAGAAACAAGGTTGACAAAAATGCCATATCTGACACAATGAGAGGAGCAAGCAAGGAAAAACTGCAAAATTCTCTTAAGCAGGCCCAGCAACGGCTCCACATCTTGCAGATTGATGTGGAATCCTCGGCATCTTTGCTTGAAGATGAATGCAACAAGAAATATGGGAAGGTTGGCAAATCATTCTATTATTCACAGGTGGCAAGTACTGTTAGGTGGCTCTCAACAACAAATTCAGCCGATCTGATTAGTCGGCTTGGAGGGACTAATGCTTCCTCATCAATGATGGTATCGCCTGAAGCAGAAAATCCTCTTTCTACACCGCCTTTGTCAGATCCTTCTGGGAAGGAAGGGGCTGACAATGAACCTGATGCCATTGCTGAGTTAGAAACCTTCGAAAATTCATCCATGGAGACAAAGTTGCCACCTATTCCATCCTTCTCAGAGTTTGTTAGCAGTAAGAAGGTAAAAGGTGATCAGAGAAGAACCAAACAAGAGCATTCACTAAGAGTAGAGAAAAGGTCCAGGCTATCATAG 2298 0.4034 MCMSKPSRKAPLTISQFSWFIASKAIVVDNQMDKCPLPLKSNTHENKKRVLSGKEALAKLLRWHFGYPDFRGNQLEAIQAVLSGRDCFCLMPTGGGKSLCYQIPALAKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSTQTADAKNKIYENLDSAKPSIRLLYVTPELIATQGFMLKLKRMYAKGLLDLVAIDEAHCISTWGHDFRPSYRKLSSLRDHFLDVPVLALTATANPKVQKDVVKSLNMQNPLILKSSFNRPNIYYEVRYKDLLEDAYSDLSNMLKSKGDVCAIVYCLERSTCDDLAALLLQNGISCAAYHAGLNNKLRTSVLDNWISSKIQVVVATVAFGCTIAPQLLSFWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSFLYYGVDDRKRMEFILSKSGSNKSQSSSSQEESSERSIADFNQMVEYCEGSGCRRKKILESFGEKVTASLCAKSCDACRHPNLIARYLEDVIAARSLHQKYNSSRVIISSSTGGVDEEQVSEFWNLDEEASGSDEDISDSDDGTEIVNNLTGLKSKSRLRVEAKIAFLQRAEENFYQKENADKQRNKVDKNAISDTMRGASKEKLQNSLKQAQQRLHILQIDVESSASLLEDECNKKYGKVGKSFYYSQVASTVRWLSTTNSADLISRLGGTNASSSMMVSPEAENPLSTPPLSDPSGKEGADNEPDAIAELETFENSSMETKLPPIPSFSEFVSSKKVKGDQRRTKQEHSLRVEKRSRLS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1705 765 FunFam RecQ family DNA helicase 260 500 - -
Acco13g1705 765 CDD SF2_C_RecQ 260 408 - -
Acco13g1705 765 MobiDBLite consensus disorder prediction 678 697 - -
Acco13g1705 765 Pfam DEAD/DEAH box helicase 74 240 IPR011545 GO:0003676|GO:0005524
Acco13g1705 765 FunFam ATP-dependent DNA helicase 51 259 - -
Acco13g1705 765 PANTHER DNA HELICASE RECQ FAMILY MEMBER 51 618 - -
Acco13g1705 765 Gene3D - 29 259 IPR027417 -
Acco13g1705 765 CDD DEXHc_RecQ 59 259 - -
Acco13g1705 765 SMART helicmild6 303 399 IPR001650 -
Acco13g1705 765 MobiDBLite consensus disorder prediction 678 765 - -
Acco13g1705 765 Coils Coil 606 626 - -
Acco13g1705 765 Pfam Helicase conserved C-terminal domain 278 397 IPR001650 -
Acco13g1705 765 Gene3D - 260 499 IPR027417 -
Acco13g1705 765 SMART ultradead3 66 268 IPR014001 -
Acco13g1705 765 Pfam RecQ zinc-binding 412 483 IPR032284 -
Acco13g1705 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 411 IPR027417 -
Acco13g1705 765 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 78 252 IPR014001 -
Acco13g1705 765 MobiDBLite consensus disorder prediction 741 765 - -
Acco13g1705 765 NCBIfam RecQ family ATP-dependent DNA helicase 60 485 IPR004589 GO:0004386|GO:0006310
Acco13g1705 765 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 272 439 IPR001650 -
Acco13g1705 765 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1705 Acco-ChrAcco13 22735301 22746599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1705 63 445 Eukaryotic Initiation Factors Gene Family AT3G19760 19.950 2.28e-07 52.0