Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1697 ATGTTAATATCAAAGACACTCTTCACCTTCCTCTTGCTCATTCTTCGTCTTTCAATTTTAGCTCATGCACAGCAACAAAGAGGTTTCGTAAGCATTGATTGTGGTGGTCCAGAGAATTTTGAATATACAGATGGTAACATTAAGTACAGCACAGATGGAACTTATATTAACACAGGGGTCAACAGAAATATTTCCTCTGAATATAACTACCCAAAGAATCCAAATCTGCCACAACCACTTTCAGATCTCAGAAGTTTTCCAGAGGGTAAGAGAAATTGTTACAGAATAAAAACTCCAATAAGAAACAGTTTGCATTTGATAAGGGCTTCTTTCTTATATGGGAACTATGATGGAGAAAACAAGCTTCCAGAATTTGATCTCTATGTGGATGTCAATTTCTGGTCCTCAGTAACATTCAGAAATGCTTCAGTGCAACTCATAATGGAAATCATCAGCTTGAAAGTAGCAGAGGAGATCAATGTCTGTCTTGTGAACAAAGGATTGGGAATTCCTTTCATCTCAGCATTGGAACTTAGACCAATCATTTATGGCCCTGTTTATGCTACTGAGTTTGGGTCATCATCTGCTTCACTTTTACTCTTCAAAAGATGGGACATTGCATCTGTCAATGGAAGTGGGAGATATGAAGATGATGTTTATGATAGAATTTGGTCTCCTTACAGTTCATCTTCCTGGGAGACTACAGAAACTTCTTCAGCCATCAATGGTGACAAAAGTGGCTATAAAGCGCCATTTGAAGTTATTAGGACTGCTGCTAGACCTAAGAATGAGAGTGCTGCTTTGGAATTCTCCTGGGAACCGAATGATCCAAACTTTAAATTTTATGTGTATTTGTACTTTGCTGAGGTTGAGAAGCTTCAGAAGAAGGAACTGAGGAAATTCAATATATCCTGGAATGGATCTCCATTATTTGGTCCCTTTTCCCCTCTTTACTTACAAGCAACCACTGTGTCGAATTCAAAATCTTTAGTGGGAAATAAACATCAAATTTCAATTTCTAGAACTGGAGACTCAACCTTACCTCCCATCCTCAATGCAGTTGAAATTTATGTGGTAAGACAGCTAGATGCAATACCAACATTTAAACAAGATGTTGATGCTATCATGAATATCAAAGGAACGTATAGTGTTCAAAGAAATTGGGTAGGTGATCCTTGTGAGCCAAAGGACTATATTTGGGATGGCTTGGAATGTAACTACAGTAACTCGCCTCCGCTAATTATATCACTGAATTTGAGTTCAAGCAGTTTGAGTGGGGCAATAGCTCCTGCAATATCCAATCTCTTGTTTCTAAAATCATTGGATTTATCAAACAATAGCTTAACTGGACCAATACCTCAGTTTATGGAAGACTTCAAATCCCTTAAAGTTCTGAACTTGAAAGGCAATCATCTGTCAGGTTTTGTCGCTGATAATCTTCTAGAAAGATCAAGAGCTGGATTACTTACACTGACTGTAGATGACCAAAATATCTGTGGCTCAAGTACGTGCAAGAAAAAGAAGAGTATTGCTGTTCCCTTAGCTGTTTCTATATCGTCAGTTCTGGTTCTGTTGATTGCACTTGTTCTTATCAGGAAATTGAGAAGGAAAAAACCATCAGATAAGGAGATAGAAAAGGCTAACAAAGGTGGTGGCAGAACTATAGCATCCAAAAAGTGGCAATATAGCTATGAGGAGGTTTTGGAAATCACCAACAACTTTGAAGTGGCAATTGGAAAAGGAGGATTCGGAATAGTGTACCGTGGTGAGTTGAAAGATAGGAACCAAGTTGCAGTGAAAATGCTTTCTCCATCATCATCTCAGGGGCCAAGGGAATTTCAAACAGAGGCTGAGCTGTTGATGACAATTCATCACAGAAACTTATTATCCTTCATTGGTTATTGTGATGATGATAATAAGATGGCACTCATTTATGAGTACATGGCCAACGGCAACCTGAAAAATTATCTCTCAGATAAAAACTCAAATAGCTTGACGTGGCAAAAGAGACTTGAGATAGCAATTGATGCTGCACAAGGATTGGAATATCTACACCATGGGTGCAAGCCACCTATAATACACAGAGATGTGAAGACAGCCAACATTCTGTTGAATGAGAACTTGGAAGCTAAGATAGCCGATTTTGGCCTCTCCAAGGTGTTTAAGAATGATAACACTAATTCAGAGTCTGAAGTCATGGGAACCACAGGCTACCTTGACCCAGAATACTACAAGTCAAGAAAGTTGAACGAGAAAAGTGACATTTATAGTTTTGGAATAGTTATATTCGAGCTAATAACCGGTCAACCAGCGGTGATAAAAGGTGAAGAATTGGAACACATAACTGCATGGGTAACAAATGAACTTAAAAGAGGGGATTTTAGCAGAATTGTAGATCCAAGACTTGAAGGCAAATTCAGTGCAAGTTCTGTGGAAAAAGCTTTAGGAGTAGCAGTGGCATGTTGTGCATCACCCTCCATTCACAGACCTTCCTTGAATTTTGTGGTGCAAGAGCTGAAGCAGTGTTTGGAAATGGAGTTGCCTTCTCACAGTGACAGACTTGAGATGGAACCAAGGCAGGTTTATAGTGAGATGTATAGTTCGTCTGAGCCTTATTCTTATGATACTGATTCTTTCACTTCTCCTTTTGCTAGATAG 2658 0.389 MLISKTLFTFLLLILRLSILAHAQQQRGFVSIDCGGPENFEYTDGNIKYSTDGTYINTGVNRNISSEYNYPKNPNLPQPLSDLRSFPEGKRNCYRIKTPIRNSLHLIRASFLYGNYDGENKLPEFDLYVDVNFWSSVTFRNASVQLIMEIISLKVAEEINVCLVNKGLGIPFISALELRPIIYGPVYATEFGSSSASLLLFKRWDIASVNGSGRYEDDVYDRIWSPYSSSSWETTETSSAINGDKSGYKAPFEVIRTAARPKNESAALEFSWEPNDPNFKFYVYLYFAEVEKLQKKELRKFNISWNGSPLFGPFSPLYLQATTVSNSKSLVGNKHQISISRTGDSTLPPILNAVEIYVVRQLDAIPTFKQDVDAIMNIKGTYSVQRNWVGDPCEPKDYIWDGLECNYSNSPPLIISLNLSSSSLSGAIAPAISNLLFLKSLDLSNNSLTGPIPQFMEDFKSLKVLNLKGNHLSGFVADNLLERSRAGLLTLTVDDQNICGSSTCKKKKSIAVPLAVSISSVLVLLIALVLIRKLRRKKPSDKEIEKANKGGGRTIASKKWQYSYEEVLEITNNFEVAIGKGGFGIVYRGELKDRNQVAVKMLSPSSSQGPREFQTEAELLMTIHHRNLLSFIGYCDDDNKMALIYEYMANGNLKNYLSDKNSNSLTWQKRLEIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLNENLEAKIADFGLSKVFKNDNTNSESEVMGTTGYLDPEYYKSRKLNEKSDIYSFGIVIFELITGQPAVIKGEELEHITAWVTNELKRGDFSRIVDPRLEGKFSASSVEKALGVAVACCASPSIHRPSLNFVVQELKQCLEMELPSHSDRLEMEPRQVYSEMYSSSEPYSYDTDSFTSPFAR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1697 885 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 648 851 - -
Acco13g1697 885 Pfam Malectin-like domain 32 358 IPR024788 -
Acco13g1697 885 Gene3D Ribonuclease Inhibitor 364 486 IPR032675 -
Acco13g1697 885 SUPERFAMILY Protein kinase-like (PK-like) 560 873 IPR011009 -
Acco13g1697 885 FunFam Leucine-rich repeat receptor-like kinase 370 500 - -
Acco13g1697 885 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
Acco13g1697 885 CDD STKc_IRAK 578 841 - -
Acco13g1697 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Acco13g1697 885 ProSiteProfiles Protein kinase domain profile. 572 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1697 885 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Acco13g1697 885 Pfam Leucine Rich Repeat 438 454 IPR001611 GO:0005515
Acco13g1697 885 Gene3D Phosphorylase Kinase; domain 1 554 647 - -
Acco13g1697 885 SMART serkin_6 572 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1697 885 FunFam Leucine-rich repeat receptor-like protein kinase 550 647 - -
Acco13g1697 885 Gene3D Transferase(Phosphotransferase) domain 1 648 862 - -
Acco13g1697 885 Pfam Protein tyrosine and serine/threonine kinase 575 786 IPR001245 GO:0004672|GO:0006468
Acco13g1697 885 Gene3D - 206 359 - -
Acco13g1697 885 SUPERFAMILY L domain-like 397 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1697 Acco-ChrAcco13 22453189 22457495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1697 4 870 Receptor kinase-like Gene Family AT4G29180 53.100 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco13g1697 Malectin_like 4e-102 CL0202