Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1630 ATGGAAAATAATTATATGAAGAAGGTGATGAGTGATGAACAAATAGAGACACTAAGAATGCAAATAGCATTATATAACTACATATGTGACTTGCTTGCTGACAACTACTGTCTCACCCTTCAGCCACCTTTGCCAGATTTTTCATTTCCAGAAGTTAAAGTCGAAAACGTACACCGGAAAGAGCCCTTGATGTTGCATGGTGGCCAAAGAAGGCGATGGACTCCGACAAGAGAACAGATTCAGATTCTGGAGAGTTTATTTGAGGAAGGCGACGGATCTCGTCCAGACAAGCAGAAGATTAAGGAGATTACGGCGGTGTTGAGTCAGCACGGCGAGATTTCTGAGACAAATGTGTACACTTGGTTTCAGAACCGGCGAGCTCGGAAGAGGAAGATGCATGATCATAAAAATCAAAATATGATGAAGATGTTTCAAGTGGATCAGTTGGTGTCAACTAGTACATATAATAATAATAATAATAATAATAATAATAATAGTAATCAAGTTGAGTTCATGTCCTGGGTCAATAATTATGTGCCATTTTAG 546 0.3883 MENNYMKKVMSDEQIETLRMQIALYNYICDLLADNYCLTLQPPLPDFSFPEVKVENVHRKEPLMLHGGQRRRWTPTREQIQILESLFEEGDGSRPDKQKIKEITAVLSQHGEISETNVYTWFQNRRARKRKMHDHKNQNMMKMFQVDQLVSTSTYNNNNNNNNNNSNQVEFMSWVNNYVPF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1630 181 SUPERFAMILY Homeodomain-like 64 135 IPR009057 -
Acco13g1630 181 CDD homeodomain 70 133 IPR001356 GO:0003677
Acco13g1630 181 PANTHER WUSCHEL-RELATED HOMEOBOX 13 4 163 IPR044559 GO:0003700
Acco13g1630 181 Gene3D - 68 141 - -
Acco13g1630 181 ProSiteProfiles 'Homeobox' domain profile. 66 132 IPR001356 GO:0003677
Acco13g1630 181 SMART HOX_1 68 136 IPR001356 GO:0003677
Acco13g1630 181 Pfam Homeodomain 70 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1630 Acco-ChrAcco13 20474332 20476349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1630 8 133 Wox Gene Family AT4G35550 51.515 5.01e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco13g1630 Homeodomain 5.8e-17 CL0123