Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1599 ATGAACTCAATTCTGGCTAATCCTTGGTGGAGCACTCAGGTGGGGTTGCCGGGGGTTGACCCGGCAGCCAATTCACCCGCAGTGAACAAACGACACGGCACCACCACCACCACGGACCTCTCTATCGATGAAAGCAGCGGGAAGAACAGTGGTGGCGAAGACGATGAGCCCAAAGAAGGTGCAGTTGAGGTCGGAACTCGCAGACCTCGAGGCCGACCGCCTGGTTCAAAGAACAAGCTGAAACCGCCGATCTTTGTGACGCGGGACAGCCCAAATGCCCTCCGAAGCCACGTAATGGAGGTCGCTGGCGGAGCCGATGTAGCTGAAAGCGTAGCTCAGTTCGCTCGGCGCCGTCAACGTGGGGTTTGTGTACTTAGTGGAAGCGGCTCTGTCGCCAACGTCACTCTTCGCCAACCTGCAGCTCCGGGTGCTGTTGTAGCACTCCATGGAAGGTTTGAAATTCTATCCCTAACCGGAGCCTTCTTGCCAGGGCCGGCTCCACCTGGATCTACGGGACTTACCGTTTACCTCGCCGGAGGGCAAGGGCAGGTTGTAGGTGGAAGCGTGGTGGGGTCACTAGTAGCAGCAGGACCAGTGATGGTCATTGCTGCAACTTTTGCAAATGCAACTTATGAGAGACTACCTCTTAATGATGAAGATGAAGGCATGACCACGGGGCAAGGCGGTGGTGGTGGCGGAGGAGGAGGGTCTTCACCGCCGCCACAACCAGGGATCGGAAGCAGTAGTGGGGGCCACTTGCAGCAGGGTGGGATTCCAGATCCTTCATCGCTTCCTTTGTATAATCTGCCACCAAATCTACTTCCCAATGGTGGTGGTGGAGGGCAGGTAGGTCATGAAGCTCTTGCTTGGGCATCTCATGGTGGAAGACAACCTTACTAG 900 0.5656 MNSILANPWWSTQVGLPGVDPAANSPAVNKRHGTTTTTDLSIDESSGKNSGGEDDEPKEGAVEVGTRRPRGRPPGSKNKLKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLNDEDEGMTTGQGGGGGGGGGSSPPPQPGIGSSSGGHLQQGGIPDPSSLPLYNLPPNLLPNGGGGGQVGHEALAWASHGGRQPY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1599 299 Gene3D - 94 224 - -
Acco13g1599 299 MobiDBLite consensus disorder prediction 48 66 - -
Acco13g1599 299 MobiDBLite consensus disorder prediction 217 299 - -
Acco13g1599 299 FunFam AT-hook motif nuclear-localized protein 94 221 - -
Acco13g1599 299 CDD DUF296 95 178 IPR005175 -
Acco13g1599 299 PIRSF ESCAROLA 17 299 IPR014476 GO:0003680
Acco13g1599 299 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
Acco13g1599 299 MobiDBLite consensus disorder prediction 1 88 - -
Acco13g1599 299 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 291 IPR014476 GO:0003680
Acco13g1599 299 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Acco13g1599 299 MobiDBLite consensus disorder prediction 241 256 - -
Acco13g1599 299 MobiDBLite consensus disorder prediction 28 47 - -
Acco13g1599 299 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1599 Acco-ChrAcco13 19395039 19397355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1599 5 299 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.794 1.57e-98 289