Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1549 ATGAGAAACTCCATACTCTACCATGTTTCTCTTCTCTTCTTCTCCTTCTTCATCTTCTTCCTCCTTCATCTTCCTCATCCTTCACAAGCTCAAAACGACATACAACCCAACACCACCGGCTACCAGTGCCCCGCCAACCAGACCGCCGGTTCCGGCTACCCCTGCCGGACCTACGCCTTCTACCGAGCTTCAGCCCCTAATTTCCTCGACCTCGCTTCCATTGGTGACCTCTTCTCCGTTAGCCGACCCATGATTGCAGATCCAAGCAACATTTCTACTCCTAATTCAACTTTAGCCACAAATCAACCCCTCTTCATTCCCATATCTTGCTCCTGCAACTTCATCAACTCATCCTTCGGTTCCATCTCTTACGCCAATCTCTCATTCACCATCAAGAAAGGAGACACGTTCTACCAAGTCTCCAGTTTTAGCTACATGAACCTCACGACCTACCAATCTGTCGAAGTCGTAAACCCTACCCTCATCGCGGAGAATTTGACGATCGGCGTTACCGCCTTGTTCCCTGTGTTCTGCAAGTGCCCTAACACCACTCAATTGCAAAACGGCGAGAACATCCTGATTACCTACGTGGTTCAACCATCCGATAACGTATCGTCGATTGCCTCCTTTTTTGGATCGAAACCGCAGTCAATAATTGATGCTAACAGGAAAGGTTTCCGAGAATTAGACACTATCTTCGTTCCGGTGTCGAAATTGCCGGTGCTGACTCAGCTTGCGGTCAACACTTCCGCGCCGCCTCCTGCTGCAACACCTGTAACTTCCGGAGGCGACAGAACAGGAACTGTGCGAGGATTGGCGATTGGGTTAGGGATTGTTGGGTTACTGTTGCTTCTGATTTTGGGGATGTGGGTTTTCAGGGAGGGTTTGTTCAAAGACCGATTGGCGACGGTGGTCGAAGATGAAGAGAGGCGGAAGCAGAGCTTTGTGAAGGAGACGAAGAAGGGATCGAAGGAAGAGGAGGCGAAATTGATGGCGAATGTGTCGGATTGTTTGGATAAGTATAGGGTTTTTGAGTATGAAGAACTGAGAGAAGCCACTGATGGATTTGATCAGAACTGCTTGATTCTAGGGTCTGTGTATAAAGGAACCATTGATGGAGAGGTCTATGCGATAAAGAAGATGAAGTGGAATGCTTATGAGGAGCTCAAGATCTTACAGAAGGTGAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGACGACGATGAAGCAAACTGCTATCTAGTCTATGAATATGTTGAAAACGGATCCCTCTACTCGTGGCTACATGAAGGCCGGACCGAACGGTTGAATTGGAAAATGAGACTACATGTGGCCATCGATGTAGCCAATGGCTTGCAATACATCCATGAGCACACAAGACCAAGGGTTGTGCACAAAGACATCAAGACTAGCAACATCCTCTTGGACGCCAACATGAGAGCCAAGATAGCCAATTTTGGACTTGCAAAGTCCGGAATCAATGCCATCACGATGCACATCGTGGGGACTCAGGGCTACATAGCTCCTGAATATCTTGCTGACGGCATGGTATCGACCAAGATGGATGTGTTCTCCTTTGGAGTAGTTCTTCTTGAACTAATCACGGGCAAAGAAGCCGTTGATGACAGAGGGAATCCCCTGTGGACGAGCGTGGTAAGATCTTTTGAAGTGGGTATTAGTGAGGAAGAGAAGGCCAAGAGACTAAGGGAATGGTTGGATGGTTCCCTTATGAGAGAGACATTGTCAATGGAGAGTCTAATGGGTGTGCTTAATATTGCACTTGCTTGCTTGCATAAGGATCCAACAAAGAGGCCAAGTATGGTGGATATTGTTTATGCTTTGAGTAAAAGTGAAGATTCCAATTTTGATACCTCCGATGATACCATAGGTTCTCCATTGGTATCCGCAAGGTGA 1923 0.4727 MRNSILYHVSLLFFSFFIFFLLHLPHPSQAQNDIQPNTTGYQCPANQTAGSGYPCRTYAFYRASAPNFLDLASIGDLFSVSRPMIADPSNISTPNSTLATNQPLFIPISCSCNFINSSFGSISYANLSFTIKKGDTFYQVSSFSYMNLTTYQSVEVVNPTLIAENLTIGVTALFPVFCKCPNTTQLQNGENILITYVVQPSDNVSSIASFFGSKPQSIIDANRKGFRELDTIFVPVSKLPVLTQLAVNTSAPPPAATPVTSGGDRTGTVRGLAIGLGIVGLLLLLILGMWVFREGLFKDRLATVVEDEERRKQSFVKETKKGSKEEEAKLMANVSDCLDKYRVFEYEELREATDGFDQNCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDEANCYLVYEYVENGSLYSWLHEGRTERLNWKMRLHVAIDVANGLQYIHEHTRPRVVHKDIKTSNILLDANMRAKIANFGLAKSGINAITMHIVGTQGYIAPEYLADGMVSTKMDVFSFGVVLLELITGKEAVDDRGNPLWTSVVRSFEVGISEEEKAKRLREWLDGSLMRETLSMESLMGVLNIALACLHKDPTKRPSMVDIVYALSKSEDSNFDTSDDTIGSPLVSAR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1549 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Acco13g1549 640 FunFam PTI1-like tyrosine-protein kinase 3 422 631 - -
Acco13g1549 640 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1549 640 Pfam LysM domain 196 233 IPR018392 -
Acco13g1549 640 SMART serkin_6 356 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1549 640 CDD LysM 194 223 IPR018392 -
Acco13g1549 640 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Acco13g1549 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 622 - -
Acco13g1549 640 SUPERFAMILY Protein kinase-like (PK-like) 340 617 IPR011009 -
Acco13g1549 640 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Acco13g1549 640 Pfam Protein kinase domain 364 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1549 Acco-ChrAcco13 16956228 16959662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1549 14 619 Receptor kinase-like Gene Family AT2G23770 32.701 1.20e-87 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco13g1549 Pkinase 2e-42 CL0016