Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1496 ATGGGCAAGACCAGCAAATGGCTCCGAAGCATCTTGACCGGCAAGAAAGACAAAGTCAAAGACACTGACAAATATCCAAAAACCACTGACATTACAACAACCCCCAGAGAAAAACGACGATGGAGCTTCCGAAGATCCTCCGCCTCATCCACCACACCTACGACCACGACACCGCCTCCTCCGGCAGAATCAAACCCCGTCGCTTCTACCTCACAGCAGACAGATATTACCACTGACGATGAGCAGCAACAGATGAAACACGCCATGGCCGCTGCAGATGCCGCCGCCGCCGCCGCCGTGCAGGCTGCCGCAGCTGTCATTCGCTTGACCGCTGAGGAGGCTGCGGCCATTAAAATTCAATCTGTTTTCCGTTCGTACTTGGCACTGGTGAGGGGTCACTTGGTGAGGAAGCAAGCGACGGATACTTTGAGGAGAATGCAGGCTCTGGTGACGGCTCAGGCAAGGGCTCGAGCTCACAGGATTCAAATGGCTTTATCGGAAGATCACAACTATACTAATAATAATCAGAGAAGACATTTTCAAGAAAACATGTTCCAGCAGATCTATGATGAAATAGACATGAACCAAGAAGAGAACATCAAGATAGTGGAAATGGATGTATGTGAGACCAAAGGTGACTGTAGAAGGAGAAGAAACAACACCAACAACAATAACTACAACCCAAATTACCATCACACATACTATTCACCAAAGCAAGAAGCCCAACAGACCACCTCCCCAAGCCCATCAACCTTGACCGACATGAGCCCACGGGCCTATAGTGGCCACTTTGAGGACTGTACATCCTTTGGAACAGCCCAAAGCAGCCCACAACTCTACTATTCAGCCGTGTCGAGGCCCGAAGATCTCAAAAACCTCCCTTTCACCTTCCCAAAACCACCACCCTATGCAGAATCAGTCATGTCTTATGACTACCCTTTGTTCCCAAACTACATGGCCAACACTGAGTCGTCTCGAGCCAAGGCGAGGTCGCAGAGCGCGCCGAAGCAACGGCAACCAGAGACGTTCGAGCGGCAGCCGAGCCGGCGGCGGCCTTCAGTGGAAGGGAGGAATGTACCTAGGCCCGTGAGGATGCAAAGGTCGTCATCTCATGTGGGCTCCACGGCCCATAACTACCAGTATCCTTGGTCCATGATCAGGCTTGATAAGTCCTCTGCTTCACTCAACCATAGTGAGTGTGGATCTTCCAGTACTGTTCTCACTAATACTAACTACTGCAAATCCCTTGTTGCTTGTGATCCTTATGGAGGAAGGTACTATTACTAA 1287 0.5051 MGKTSKWLRSILTGKKDKVKDTDKYPKTTDITTTPREKRRWSFRRSSASSTTPTTTTPPPPAESNPVASTSQQTDITTDDEQQQMKHAMAAADAAAAAAVQAAAAVIRLTAEEAAAIKIQSVFRSYLALVRGHLVRKQATDTLRRMQALVTAQARARAHRIQMALSEDHNYTNNNQRRHFQENMFQQIYDEIDMNQEENIKIVEMDVCETKGDCRRRRNNTNNNNYNPNYHHTYYSPKQEAQQTTSPSPSTLTDMSPRAYSGHFEDCTSFGTAQSSPQLYYSAVSRPEDLKNLPFTFPKPPPYAESVMSYDYPLFPNYMANTESSRAKARSQSAPKQRQPETFERQPSRRRPSVEGRNVPRPVRMQRSSSHVGSTAHNYQYPWSMIRLDKSSASLNHSECGSSSTVLTNTNYCKSLVACDPYGGRYYY 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1496 428 MobiDBLite consensus disorder prediction 323 374 - -
Acco13g1496 428 ProSiteProfiles IQ motif profile. 112 141 IPR000048 GO:0005515
Acco13g1496 428 MobiDBLite consensus disorder prediction 1 84 - -
Acco13g1496 428 Pfam IQ calmodulin-binding motif 114 128 IPR000048 GO:0005515
Acco13g1496 428 MobiDBLite consensus disorder prediction 214 260 - -
Acco13g1496 428 MobiDBLite consensus disorder prediction 219 257 - -
Acco13g1496 428 MobiDBLite consensus disorder prediction 10 44 - -
Acco13g1496 428 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Acco13g1496 428 Pfam Protein of unknown function (DUF4005) 294 357 IPR025064 -
Acco13g1496 428 MobiDBLite consensus disorder prediction 323 341 - -
Acco13g1496 428 MobiDBLite consensus disorder prediction 342 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1496 Acco-ChrAcco13 15419735 15422873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1496 1 412 IQD Protein Family AT4G14750 45.475 1.42e-100 306