Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1493 ATGGCGGCTGCCCCACCTTCGGCGGAAGGAGAAAAAATGTCTCTGAAAGATCAGGGCAATGAGTTTTTCAAGTCTGGGAAGTATCTCAAAGCCGCAGCACTGTACACCCAAGCTATCAAGCAAGATCCTTCAAACCCTACGCTTTATAGTAACCGTGCAGCTGCATTGCTACAACTGGATAAGCTTACAAAAGCTCTTGAGGATGCCGAGATGACAATAAAACTAAAACCTGAATGGGAAAAGGGGCATTTTAGGAAAGGATGTGTACTTGAGGCCCTGAAGCGATATGATGACGCCTTAGCTGCCTTTCAGATGGCTTTGCAGTATAACCCACAAAGTCAAGAAGTATCAAAAAAGATAAGGAAGATAAACCAACTAGCAAAAGATAGAGATCGAGCACAAGAAGTGGAGGATAAAAGATCTAATGTGGACATGACTAAGCATTTAAATACATTGAAACCTGAATTGTCTGCAAGGTATGGATCTGAAGAATGCTGGAAAGACTTGTTTTCTTTCATTGTTGAGACCATGGAGACAGCTGTAAAATCATGGCATGCAACTTCTACAGTGGATCCTAGAGTCTATTTCCTTCTTGATAAGGAAAAGACAAATACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACACATGGAAGCTGTTTTTCATTTCTCAGGCAATATGCTGAAGACTCCTTTTCCAGAGCAGCTTGCTTAGTGGTTCCCAAAAGCATAATTGCTTATCCACAGGTCTGGAAAGGCCAAGGATCAAGGAGATGGAAACATGGTCAGAATGATGGTTTCTTTGTTCAATTTGAATCATCTTCACATAGGAAACTCTGGTTTATTCCCAGTTCTAATGAAATGGGACAAACATTATGCAGGGACCCAGAAGTCTTGGACATTGGCGCTCATGAAATTCTTCCGCGTCTATTCAAAGAAGAGCTGCCTAGTTCTTAG 978 0.4141 MAAAPPSAEGEKMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLTKALEDAEMTIKLKPEWEKGHFRKGCVLEALKRYDDALAAFQMALQYNPQSQEVSKKIRKINQLAKDRDRAQEVEDKRSNVDMTKHLNTLKPELSARYGSEECWKDLFSFIVETMETAVKSWHATSTVDPRVYFLLDKEKTNTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACLVVPKSIIAYPQVWKGQGSRRWKHGQNDGFFVQFESSSHRKLWFIPSSNEMGQTLCRDPEVLDIGAHEILPRLFKEELPSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1493 325 SMART tpr_5 80 113 IPR019734 GO:0005515
Acco13g1493 325 SMART tpr_5 12 45 IPR019734 GO:0005515
Acco13g1493 325 SMART tpr_5 46 79 IPR019734 GO:0005515
Acco13g1493 325 Pfam TPR repeat 19 59 - -
Acco13g1493 325 Gene3D Tetratricopeptide repeat domain 11 125 IPR011990 GO:0005515
Acco13g1493 325 SUPERFAMILY TPR-like 14 123 IPR011990 GO:0005515
Acco13g1493 325 FunFam serine/threonine-protein phosphatase 5 11 125 - -
Acco13g1493 325 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Acco13g1493 325 ProSiteProfiles TPR repeat profile. 12 45 IPR019734 GO:0005515
Acco13g1493 325 Pfam Tetratricopeptide repeat 81 112 IPR001440 GO:0005515
Acco13g1493 325 Coils Coil 52 72 - -
Acco13g1493 325 PANTHER TPR REPEAT CONTAINING PROTEIN 5 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1493 1 123 U-box Gene Family AT3G07370 29.268 5.21e-08 51.6