Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1492 ATGGCCTCTCTTCTTCCTCAGCCTCATCGTCATCGTCTTCTTCCTCTACCAATATTTTCTGTTATCTTCTTCCTCTTTTTTCTTCTCTCCATTATCAAACCTTCTCACCAAGCTTCTTCTTCTTCTAATGTCACCGTCCCCTTAAACCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAACATTCCATCACCTCTGATCCCAACAACTTCACCTCCAACTGGTACGGCTACCATGTGTGCAACTACAAAGGCGTTTACTGTGCACCGGCGCCTGATGATCCCCACATCTACACCGTCGCCGGCATCGACCTCAACCACGGCAACATCTCCGGCACCTTGCCGGAAGACCTCGGTCTCCTCACCGACCTCGCCCTCTTCCACCTAAACTCTAACCGCTTCTGTGGGACCCTCCCACAGAGCTTCCGTAACCTCCACCTCCTTCACGAGCTTGACGTCAGCAACAACCAATTATCCGGTCCCTTCCCCGACGTCGTTTTATGTCTCCGTTCTTTGAAGTTCCTGGACATTAGGTTCAACTCTTTCTATGGCAAAGTCCCTTCCGATCTCTTTGACCTTAAACTCGATGCCGTTTTCATAAACGACAATAAGTTTCAGTTCTCGTTGCCGGAGAATCTCGGGAATTCGCCGGTGTCCGTCTTGGTCTTCGCCAATAATAATCTCAAGGGCTGTGTTCCCGCGAGTTTGGGGAAAATGAAGGCCACGCTTAATGAGATTATTATTTCAAACAGTGGATTAAAGGGTTGTTTGCCGGAGGAGATTGGTAAATTGGATCAGGTTACGGTGTTTGATGTGAGTGATAATAATTTGGTCGGGACATTGCCGGAATCTATTGAGGGCATGAAGAAGTTGGAGCAGTTGAACGTGGCGCATAATGAGCTATCCGGCGAGATTCCGGCGAGTGTCTGCTCGTTGCCGAGGTTGCAAAATTTTACTTACTCCTTTAATTACTTCTGCAGTGAACCGCCTACCTGCCTGAAGTTGCGGGCGAAAGATGACCGCAAAAATTGCATTCCGTACCGGCCGTTGCAGCGGTCAGAGATGGAATGTGAAGCTTTTTATGCTCACCCGGTTGATTGTGGCGCCTTTGGATGTTCACGGCCACCTCCGCCACCGCCACCTCCTCCATCTCCTCCTCCGCCGCCACCCCCTCCTCCGCCGCCTCCGCCGCCACCACCACCCCCTCCGCCGCCGCCACCTCCCCCTCCACCACCCCCTCCTCCTCCGCCGCCACCTCCCCCTCCACCACCCCCGCCTCCTCCGCCGCCACCCCCTCCTCCTCCGGCGGTTCACCATCATTATTATCCGTAA 1338 0.5277 MASLLPQPHRHRLLPLPIFSVIFFLFFLLSIIKPSHQASSSSNVTVPLNPRLIKAYYALQAWKHSITSDPNNFTSNWYGYHVCNYKGVYCAPAPDDPHIYTVAGIDLNHGNISGTLPEDLGLLTDLALFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVVLCLRSLKFLDIRFNSFYGKVPSDLFDLKLDAVFINDNKFQFSLPENLGNSPVSVLVFANNNLKGCVPASLGKMKATLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSDNNLVGTLPESIEGMKKLEQLNVAHNELSGEIPASVCSLPRLQNFTYSFNYFCSEPPTCLKLRAKDDRKNCIPYRPLQRSEMECEAFYAHPVDCGAFGCSRPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAVHHHYYP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1492 445 Gene3D Ribonuclease Inhibitor 219 348 IPR032675 -
Acco13g1492 445 MobiDBLite consensus disorder prediction 377 445 - -
Acco13g1492 445 PRINTS Proline rich extensin signature 412 437 - -
Acco13g1492 445 PRINTS Proline rich extensin signature 394 411 - -
Acco13g1492 445 PRINTS Proline rich extensin signature 377 393 - -
Acco13g1492 445 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 330 - -
Acco13g1492 445 Gene3D Ribonuclease Inhibitor 55 218 IPR032675 -
Acco13g1492 445 Pfam Leucine rich repeat 126 183 IPR001611 GO:0005515
Acco13g1492 445 SUPERFAMILY L domain-like 56 336 - -
Acco13g1492 445 FunFam Leucine-rich repeat extensin-like protein 1 56 217 - -
Acco13g1492 445 Pfam Leucine rich repeat N-terminal domain 57 90 IPR013210 -
Acco13g1492 445 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1492 Acco-ChrAcco13 15376588 15377925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1492 49 380 Leucine-rich Repeat extension Gene Families AT3G22800 69.369 1.84e-164 470