Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1491 ATGGGTTTTGTGTATTACTGCCGCTCTCGTAGCTCTGCACTCCAAGCACCAGCCATGGCCGTCGGAAAAAATAAGAGAATTTCGAAGGGTAAAAAGGGAGGAAAGAAGAAGGCAGTTGATCCCTTTGCTAAGAAGGATTGGTATGATATCAAAGCTCCCTCTGTTTTCCAAGTCAAGAATGTGGGCAAAACCCTCGTCACTCGTACTCAGGGTACCAAGATTGCCTCTGAAGGACTGAAGCACAGAGTGTTTGAGGTCTCTTTGGCTGATCTCCAAGGTGATGAGGATCACGCCTTCAGGAAGATTAGGTTGAGAGCTGAAGATGTTCAAGGCAAGAATGTTCTCACAAACTTCTGGGGAATGGACTTCACAACTGATAAGCTGAGGTCTTTGGTTCGCAAATGGCAAACTTTGATCGAAGCTCATGTGGATGTCAAGACCACCGATAACTACACATTGAGGATGTTTTGCATTGGGTTCACAAAGAGGCGTGCGAACCAGGTTAAGAGGACCTGTTATGCCCAGTCCAGCCAGATCAGACAGATCCGCAGGAAGATGCGTGAGATTATGACTAACCAGGCTACATCCTGTGATTTGAAAGAGTTGGTCCGCAAGTTCATCCCTGAGATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGCATCTATCCTTTGCAAAACGTGTTCATTCGCAAGGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTTGGAAAACTTATGGAGGTTCATGGAGATTATTCTGAAGATGTTGGTGTTAAGGTAGACAGACCAGCAGATGAGACAATGCACGAGGCTCCCACTGAAATTGTTGGAGCTTAA 840 0.456 MGFVYYCRSRSSALQAPAMAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMHEAPTEIVGA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1491 279 SMART Ribosomal_S3Ae_2 33 239 IPR001593 GO:0003735|GO:0005840|GO:0006412
Acco13g1491 279 PANTHER 40S RIBOSOMAL PROTEIN S3A 15 271 - -
Acco13g1491 279 ProSitePatterns Ribosomal protein S3Ae signature. 79 91 IPR018281 GO:0003735|GO:0005840|GO:0006412
Acco13g1491 279 Pfam Ribosomal S3Ae family 34 239 IPR001593 GO:0003735|GO:0005840|GO:0006412
Acco13g1491 279 Hamap 40S ribosomal protein S1 [RPS3A]. 19 276 IPR027500 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1491 Acco-ChrAcco13 15355347 15358015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1491 19 279 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.786 2.03e-166 459