Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1489 ATGGACACGCCAGAGAGGAACCAGATCGGCACTCCCATTACCAAATTTGAGGATTCACCCGTCTTCAACTTTATCAGTAGTCTTTCTCCTATAAAGCCTGTTAAGTCTGTTCATAGTATTCAGACTATCAATTCACTCAGTTTTTCATCTCCTCCATCTGTGTTTACATCACCCCATGTCAGCTGTCACAGGGAATCTAGATTTCTCAGGAGGCATAACGTTTTAGATGCATCAAAACATAAGGTTTTGTCTGAAGATGGGAAAAAAATATGTTCTAGTGAAGATGCTCTTGCAGATTCAACTCATGCATATCATAACTCAAGTGAGCCACAAGGAAATGCTGATCAAAGGATTCCCCCAGAAGATTCAACAATTGAGCCATCTAATGAGCAGCCGGAGTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCAGCTTGTGATCCTCCCACTGGTGGTGATGAGACAAATTCACTTATGGATTTGTCTGGTAAAACAGCACCAGACGTTACCTATGTTGATGAAGCCTGTAAACAAAATCCACCTCAGACTGAAGTGCCGCTTCCAGGAATGTGTCAAATTGAGCCAAGCATTGGAGGCCCTGAATGTGACTGGGACGGTTTACTTGCAGATGCTACAGATCTATTAATTTTCAACTCTCCAAATGAAAGAGAAACTTTAAAGTGTCTAATGCAGAAATCATTTGAGCCCACTGGACGGTTTAGCAATTTTATGTCTCAGTTGCCACAAACTACCTTAAGTCATGGTGAGAAAATGCCAATTGTTGATCCAGCTGCTTCTGGTTTGGAACATGAAATCGAAGATCATCCTTCTCAACAAGGAGAAGTCATTGAGAATGATCAGGCACAGGACAATCTAGCTAACACTGCTGGCATGGGTTGCAATCCTAATAATACATTGAATAATCAGCTTGTTTCTATTACACGCCATGGCATACGGAGGCGTTGTCTAGACTTTGAGATGGTTGGAGGAAGAAGGAAGAACTCCAATGATGGTTCAAATAACAGTAGTTCCAGCGCATTACAATCTGATGAGAGGAATGTTGCTTTTGATAAGCAGCTGCTTCCTGCAAAACGCAATGGTAATTCACAGAGGTGCACCTTGCCTGGAATTGGCTTACACTTGAATGCTCTTGGGGGCATAAAAGATTACAAAAGCTTAAACATCGAAAATATATCTTCTGGAAGACAACTTAGTTTGCCAAGCTCTGCCTTGCAACAATCTTCAAGCCAAGAACATAGTCTAGCATTGGTGCCTGTACCAGCAGAAGGAGATTCAGGTCTGCCAGACAATGGGTTTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATGTGGTTGATGAGGATTTCAACCACAATAGCCCGAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGATGGTGAATCATGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCCGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCGGATTCTGTACCTGAAATTGGGGATGATCCGAACAAAACTCCAGCTTCTGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCAGGCTGCTTGAAGAAATATTGTGAATGCTATCAGGGTGGCGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGATGCAAGAATGGTTATGGTAGAAAGGATGGTTCTGTTCCAATTGGAATAGAAGCTGAACCAGAAGAAGAAACAGAATCATCTGAGAAGGCTGTGGCTGAAAAATCTTTACAAAAATCCGAGATCCAGAACATTGACGAACATCCAGAGTCGACTCATGCCACGACACCATTACGTATCTGCAGACCGTTGCTTCCTCTATCATTTTCATCAAAGGGAAAACCACCAAGATCTTCTTTCATTACTACTATACCAGCTTCAGGATTGTATGCCAGCCAAAAACTCGGGAAACCCAGCATCCTTCGGTCTCAACCCAAGTTCGAAAAACCGTTTAAACCAGTCTCCAACGATGAAATGCCGGAGGTTCTCCGGGGCGACGGATCTCCCAGCATCAAGACATCATCTCCAAATGGCAAGAGGATCTCATCTCCAAACTGTGAATTTGGATCATCTCCAACTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTCCCTTCTCTCACTGCTCCTCACCTTTAG 2331 0.4329 MDTPERNQIGTPITKFEDSPVFNFISSLSPIKPVKSVHSIQTINSLSFSSPPSVFTSPHVSCHRESRFLRRHNVLDASKHKVLSEDGKKICSSEDALADSTHAYHNSSEPQGNADQRIPPEDSTIEPSNEQPEFPIELPQTLKYDCGSPACDPPTGGDETNSLMDLSGKTAPDVTYVDEACKQNPPQTEVPLPGMCQIEPSIGGPECDWDGLLADATDLLIFNSPNERETLKCLMQKSFEPTGRFSNFMSQLPQTTLSHGEKMPIVDPAASGLEHEIEDHPSQQGEVIENDQAQDNLANTAGMGCNPNNTLNNQLVSITRHGIRRRCLDFEMVGGRRKNSNDGSNNSSSSALQSDERNVAFDKQLLPAKRNGNSQRCTLPGIGLHLNALGGIKDYKSLNIENISSGRQLSLPSSALQQSSSQEHSLALVPVPAEGDSGLPDNGFQPAEDCSQPSGYVVDEDFNHNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSISCRCEGCKNGYGRKDGSVPIGIEAEPEEETESSEKAVAEKSLQKSEIQNIDEHPESTHATTPLRICRPLLPLSFSSKGKPPRSSFITTIPASGLYASQKLGKPSILRSQPKFEKPFKPVSNDEMPEVLRGDGSPSIKTSSPNGKRISSPNCEFGSSPTRRSGRKLILQSIPSFPSLTAPHL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1489 776 SMART CXC_2 567 608 IPR033467 -
Acco13g1489 776 SMART CXC_2 481 522 IPR033467 -
Acco13g1489 776 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 772 IPR044522 GO:0003700
Acco13g1489 776 MobiDBLite consensus disorder prediction 334 357 - -
Acco13g1489 776 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Acco13g1489 776 MobiDBLite consensus disorder prediction 634 648 - -
Acco13g1489 776 MobiDBLite consensus disorder prediction 103 132 - -
Acco13g1489 776 MobiDBLite consensus disorder prediction 338 357 - -
Acco13g1489 776 MobiDBLite consensus disorder prediction 701 776 - -
Acco13g1489 776 MobiDBLite consensus disorder prediction 634 657 - -
Acco13g1489 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 604 IPR005172 -
Acco13g1489 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Acco13g1489 776 MobiDBLite consensus disorder prediction 728 770 - -
Acco13g1489 776 MobiDBLite consensus disorder prediction 103 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1489 Acco-ChrAcco13 15342554 15347757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1489 1 771 CPP Transcription Factor Family AT3G22780 41.594 1.12e-159 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco13g1489 TCR 1.9e-11 No_clan