Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1486 ATGATTTCGGATTTCCTGTTTCTTCTGTGCATTTGTGGGTTTTCCTCGTGCTGCTTCTTTATCATTCTAGATTCTGATCGTGCTCTCAAGGGTTTTGTAGCCGGAGAGGGAGGTGTTGGAACACCGAAGATGGATTTGGAAGCAGGGGCTCTGGATTCCAATATGAAGGGTGTTGGGAACATTAGCAGTAATGATAAAATTTTCAGAGCCGATAAGATTGATCTCCAACGTTTGGATGTGCAGCTTGAAAAGCACTTGAGCAGGGTTTGGTCCAGGAACATTGAGTCCAAAAGGCCTAAAGAAGAATGGGAGATTGATTTGGCCAAATTGAATCTCCGATACGTTGTAGCTCACGGGACCTATGGTACTGTTTATAGAGGCACCTATGATAACCAAGATATTGCAGTGAAAGTTTTGGACTGGGGTGAGGATGGTTTCGCCACTGCTGCTGAAACTGCTACTTTACGTGCATCATTTCAGCAGGAGGTTGCTGTTTGGCACAAACTTGACCATCCAAATGTTACAAAATTTGTTGGAGCTTCAATGGGAACCTTAAATCTTAAAATTCCCACAAAAAACTCTGATGGCCACGAGTCCCTTCCTTCTAGGGCTTGTTGTGTTGTTGTTGAGTATATCCCTTGTGGGACACTTAAACAATTATTGTTCAAACATAGGAATAAGAAACTTGCTTTCAAGGTTGTGACCAAGCTGGCTTTGGATCTCGCAAAGGGTCTCAGCTATCTACATTCAAAGAAGATTGTACATCGTGATGTCAAAGCAGAGAATATGTTGCTAGATCGTGGTGGAAACTTGAAAATAGCCGATTTTGGAGTCGCACGAGTTGAAGCACAAAATCCAAGTGACATGACTGGTGAAACCGGAACCCTTGGATATATGGCACCAGAGGTTTTGGATGGTAAGCCTTACAACAGAAGATGTGACGTGTACAGCTTTGGCATTTGTTTGTGGGAAATATATTGTTGTGATATCCCTTATCCAGATCTTAGCTTTGCTGAGGTGTCATTGGCAGTTGTCCGCCAGAATTTGCGGCCAGAAATCCCACGATGTTGTCCGACATCTTTGGCTAATATCATGAGGAAATGTTGGGATGGGAACCCAGACAAGCGTCCAGAAATGAGCGAGGTGGTGAGTTTTCTGGAAGCCATTGATACAAGCAAAGGAGGTGGAATGATACCAGAAGATGCCACACCCAAGTGCTTCTGTTTTGCCCCATCTCGTGGTCCCTAA 1248 0.4399 MISDFLFLLCICGFSSCCFFIILDSDRALKGFVAGEGGVGTPKMDLEAGALDSNMKGVGNISSNDKIFRADKIDLQRLDVQLEKHLSRVWSRNIESKRPKEEWEIDLAKLNLRYVVAHGTYGTVYRGTYDNQDIAVKVLDWGEDGFATAAETATLRASFQQEVAVWHKLDHPNVTKFVGASMGTLNLKIPTKNSDGHESLPSRACCVVVEYIPCGTLKQLLFKHRNKKLAFKVVTKLALDLAKGLSYLHSKKIVHRDVKAENMLLDRGGNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDIPYPDLSFAEVSLAVVRQNLRPEIPRCCPTSLANIMRKCWDGNPDKRPEMSEVVSFLEAIDTSKGGGMIPEDATPKCFCFAPSRGP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1486 415 SUPERFAMILY Protein kinase-like (PK-like) 91 386 IPR011009 -
Acco13g1486 415 CDD STKc_MAP3K-like 116 386 - -
Acco13g1486 415 Gene3D Phosphorylase Kinase; domain 1 99 193 - -
Acco13g1486 415 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 92 389 - -
Acco13g1486 415 SMART serkin_6 110 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1486 415 PRINTS Tyrosine kinase catalytic domain signature 209 222 IPR001245 GO:0004672|GO:0006468
Acco13g1486 415 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Acco13g1486 415 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Acco13g1486 415 PRINTS Tyrosine kinase catalytic domain signature 247 265 IPR001245 GO:0004672|GO:0006468
Acco13g1486 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Acco13g1486 415 Pfam Protein tyrosine and serine/threonine kinase 112 386 IPR001245 GO:0004672|GO:0006468
Acco13g1486 415 Gene3D Transferase(Phosphotransferase) domain 1 212 397 - -
Acco13g1486 415 FunFam Kinase suppressor of Ras 1 99 194 - -
Acco13g1486 415 ProSiteProfiles Protein kinase domain profile. 110 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1486 Acco-ChrAcco13 15296463 15300813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1486 54 415 MAP Kinase Kinase Kinase AT3G22750 77.686 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco13g1486 PK_Tyr_Ser-Thr 4.5e-59 CL0016