Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1457 ATGGAACCGGGCATGAGATCAGCTTGTCCTTCGGGGGTTGTGGTGAAGAGCAGGAACTCTTCTGGCTGTTTAATTGTTAGAAAGAAAGATGGGTTGGGTGGTGAACATCGTTCTTCAAGCAACTCTCGCAAGTTGTATGAGTCACAGGTTAGGAAAAGGCCTAGTATGGCTCTAAGTGATTCAGAATCAAGTGATGATGACTCGCTGATGCCTCCAAGTAGAAGACTTAATCCTGAGACTCTTCGAACCTGTAATGGATTCACTGCTTCAGAGCGAGTTATAGTGGAAGTCAATGAAATTGGTAGAAAGAGGGATAGAGTGATGCCAATCAGGCGTAAAGAGGATGCTATGATTGAGAAGAATGGTTTCGAGCAGAGAAAAAGAAAGAAGACTAAAATGGGAGTCTTCGATTTTGATGAACATGATGGTATGGATGTGGATAATATGAAAAAGAGGTTTTTTTATGATAATGACGGAGTAGGCTTTGGGGGACGAAGGTTTATGGGACAAAGGCATGCCACAAGAAGTGGCTTTGAGAGTAGGTTTGACAAAGGTTCTAGCAGACACACTCTTGATGATAGAAACAACTCCTATTTTGGCAGGCATAGTGGATTGTTTCTGGGAGATACTGTTGACCCAGGCAGGTTCAATGTGAATAGGGATGATGCTCGCCTAAGTCTACCCTTGCCAAAAGATAAGTTTATCAGGGTTCAGGGGGAAAATGGTGTTTTAAAAGTTCTGGTTAATAGGAATAAGGTGGGTGGCCCATCAGAGTACTATAATCACCACAAACCTATAGAAAACAGACAGAATTTGCAGACTGAGGCCCCCACAAAGCGGAATATTCCAGTCCATTCTTCATCATACTCAGAAACTAAACCCGTTGAGAAGCCAGGTTTAGTTGTTAGGCCGGGGAAAAAACAGATAGCATCAAGAAAATCCTTGTCAATTAAGGACCGCAAGGGACGTGATTGGGACTCTGAGGACTGTGACACACCATTGAATCAAGGACTAGAAAATACTAAACCCTTCAAGTCTGTGAAGAGGGTAGGTTCTGAGGATGAAAAGACTCCACGTGAGAAGCTTCCAACTATAATAACAAAAGATGGAAAAGAAGGAAAAGTAAGGCGTGGGAGTGCCACAGAAAAACAGAAACTGCGAGAAAAAATAAGGGAGATGCTGCTGAGTTCTGGTTGGAGTATAGATTATCGGCCTCGAAGGAACAGAGACTATCTAGATGCAGTTTACATCAATCCAGGGGGTACCTCCTACTGGTCAATAATTAAAGCATATGATGCTCTTCAAAAGCAATTGAATGGTGATGATAATGAGGCCAAGCCCATAGGTGATGGTTCTTCCTTTGCCCAGATCTCGGATGAACTGTTGAGTCAATTAACAAGGAAAACTCGGAAGAAGATGGAAAAAGAATTAAAGAAGAAGCAAAGAGATGGTAGTGAGAGTGATAGTGAAATGGAACCTGACCTTAAAAGGTCTGCCGATTTCAGGCATGATATGAATAGCATTGATAGTGATAGCAATGAAGAGAAATTGAGCTCTTTTATAAAGAAGGGTAGTAATTCAATGAAAAATAAGCTGATTGAAAATGTTGCCAGCATTAGCTTTAAATCCCAAAAATCAACCCATCACATACAAGATGGAACTGAAAATTCATTGTCTGGATGTGATTCTCCTCATCCACATGGGAGGAAAAGTAGAAAACATAGAAGATGTACTTTGTTAATCCGTAGTTCCAATAAGGGAGCGAATTCGGAATCTGATGGCTTTGTTCCATATACAGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTTCAGTTGAGCCAAAAGGTTCAGTACCGCAAACGAAAACGGGTAATGCTGGAGGGATGGATCACGAGAGACGGCATTCATTGTGGATGTTGCAGTAAAATCCTTACAGTTTCCAAGTTTGAGATTCATGCAGGTAGTAAATTGCGCCAGCCATTTCAAAACATATATTTGGATTCAGGAGTATCACTTATACAGTGCCAAATAGATGCATGGTTGAGACAGGAGAATTCAGAGAGAATTAATTTTCATTCTGTTGATGTTGATGGCAATGATCCAAATGATGACACTTGCGGTATATGTGGAGATGGAAGGGATTTAATCTGTTGTGATGGTTGTCCATCAACATTTCATCAGAGCTGCTTGAATATACAGATGCTTCCTCCTGGTGAGTGGCATTGTCCAAAATGCACCTGCAAGTTTTGTGGAATGGCCAGTAGGACTGTTAAAAAAGGAGATGATGATACTGTATATGCCCTTGTCACTTGCAACTTGTGTGAGAAAAAATACCATGAAACTTGCTCTAAGGATATGGATGCTATTTCTATCAACTCGGATATGCCAGGCTTTCATTTTTGTGGAAAAGAGTGCAAAGAGCTTTTTGAGCACTTGAAGAAATACCTAGGTACTAAGAATGAGCTAGAAGCAGGCTTTTCATGGTCTGTTATTCGTAGAGAAGATGAAGATTCAGAGGCAGCTGACAGAGGAATTTTTCAAAGGGTGGAATGCAACTCTAAGCTGGCCGTTGCACTGGCTGTGATGGATGAATGCTTTTTACCCATTATTGACCAGAGGAGTGGCATCAATTTAATTCATAATGTACTATTTAACAGTGGATCAAACTTGAGTAGGTTGAATTATAGTGGCTTTTACACAGCTATTCTAGAGAGGGGCGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGCCTAAGTTGGTGGAGATGCCGTTTATTGGAACCCGCCATATGTACAGGCGCCAGGGGATGTGCCGCCGGCTTTTTTTTGCCGTTGAATCGGCCCTCTGCTTTATGAAGGTTGAGAAAATGATTATTCCAGCAATTGCTGAACTCACACAAACATGGACAGCAATCTTTGGCTTTACACCTCTTGAAGAATCACTCAGGCAAGAAATGAGGTCTTTGAATATGCTGGTCTTCCCTGGTATTGATATGCTGCAAAAGTTGCTGGTCGAGCAAGGGAACTTTGAAGAGAATGCAACTTCCACAGGTGCTGATAAAATGGACCATGGAGACAAAGTTTCTACTAAGCCAAAATTGGCTAATTCCTCATCTCATCTAGATATTAATGGAAGCGATGATGCTGGTTCAGATCCTCTTAATGAGATAAAAGATGAATGTAGTGATGCTTCTTTAGATCAAATCAATCAAATTTTGTCTGACAAGATTGTATGTTCCAAATCGTGTTCCGAGGATAGGCTATTTGACTCAGCTTCAGATAGATGTTCTTCTCCCTCTAGTACCAGTCATGATGTGTTGGAGATGGAAAATAAAGTGGTGGCTTCTCTATCATTGAAAGATAATTTGCATATGTCTACTGATTGTCAAGGCAATTCTCTGAATGACAATCAATATATACATCCATCCGATGCTCCAGATGACCCGGAAAATTGTACTTTGGTTCAGAGAGCTGCTACTTCTGATCCTAATTCTACAAAAAACTTGGTTGAACCTGTCTCTGACTGGGAAGGTCGTTTCCCTACTGCTATAAATGATGATTCATCTGAGTTTGAGATGAACCTGATGTTGGATTCTCAAACGATGGATAATACTTTTAGGGAGGTTGACATGAATGATTTTCAAGAGGAACAGGAAGCTGTTCCTTTGGGGAGTTTGTCTGATTCTGAACTCAACCATGAAAAAAAGAATGAGACTGAGTATGAAGGGGAAAGAAACATGTATATTGACACTGAAGTTGCTTCAAAAGGAATGCAATTTTATGGAAGTGGCATGAATGAATCCAGTGATGGTTCTGAGACTGATTCGGAGTCTCAAGGGAAATATTTGCTCGTCCCTTGCATCATGGATGAGTATGAAAATTTTCACGGTTCTAAATTAAGTTTGTTTAACGGTCTTCTTATCCTTGTTTCTTCTGCCAGAGATATAATAATGCTTTTGACACAAGATTGA 3990 0.408 MEPGMRSACPSGVVVKSRNSSGCLIVRKKDGLGGEHRSSSNSRKLYESQVRKRPSMALSDSESSDDDSLMPPSRRLNPETLRTCNGFTASERVIVEVNEIGRKRDRVMPIRRKEDAMIEKNGFEQRKRKKTKMGVFDFDEHDGMDVDNMKKRFFYDNDGVGFGGRRFMGQRHATRSGFESRFDKGSSRHTLDDRNNSYFGRHSGLFLGDTVDPGRFNVNRDDARLSLPLPKDKFIRVQGENGVLKVLVNRNKVGGPSEYYNHHKPIENRQNLQTEAPTKRNIPVHSSSYSETKPVEKPGLVVRPGKKQIASRKSLSIKDRKGRDWDSEDCDTPLNQGLENTKPFKSVKRVGSEDEKTPREKLPTIITKDGKEGKVRRGSATEKQKLREKIREMLLSSGWSIDYRPRRNRDYLDAVYINPGGTSYWSIIKAYDALQKQLNGDDNEAKPIGDGSSFAQISDELLSQLTRKTRKKMEKELKKKQRDGSESDSEMEPDLKRSADFRHDMNSIDSDSNEEKLSSFIKKGSNSMKNKLIENVASISFKSQKSTHHIQDGTENSLSGCDSPHPHGRKSRKHRRCTLLIRSSNKGANSESDGFVPYTGKRTVLSWLIDSGTVQLSQKVQYRKRKRVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSLIQCQIDAWLRQENSERINFHSVDVDGNDPNDDTCGICGDGRDLICCDGCPSTFHQSCLNIQMLPPGEWHCPKCTCKFCGMASRTVKKGDDDTVYALVTCNLCEKKYHETCSKDMDAISINSDMPGFHFCGKECKELFEHLKKYLGTKNELEAGFSWSVIRREDEDSEAADRGIFQRVECNSKLAVALAVMDECFLPIIDQRSGINLIHNVLFNSGSNLSRLNYSGFYTAILERGDEIISAASIRFHGPKLVEMPFIGTRHMYRRQGMCRRLFFAVESALCFMKVEKMIIPAIAELTQTWTAIFGFTPLEESLRQEMRSLNMLVFPGIDMLQKLLVEQGNFEENATSTGADKMDHGDKVSTKPKLANSSSHLDINGSDDAGSDPLNEIKDECSDASLDQINQILSDKIVCSKSCSEDRLFDSASDRCSSPSSTSHDVLEMENKVVASLSLKDNLHMSTDCQGNSLNDNQYIHPSDAPDDPENCTLVQRAATSDPNSTKNLVEPVSDWEGRFPTAINDDSSEFEMNLMLDSQTMDNTFREVDMNDFQEEQEAVPLGSLSDSELNHEKKNETEYEGERNMYIDTEVASKGMQFYGSGMNESSDGSETDSESQGKYLLVPCIMDEYENFHGSKLSLFNGLLILVSSARDIIMLLTQD 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1457 1329 MobiDBLite consensus disorder prediction 467 515 - -
Acco13g1457 1329 Coils Coil 463 483 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 1020 1062 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 29 50 - -
Acco13g1457 1329 PANTHER PHD FINGER PROTEIN 12 371 1116 IPR042163 GO:0003714|GO:0045892
Acco13g1457 1329 SMART PHD_3 751 810 IPR001965 -
Acco13g1457 1329 SMART PHD_3 709 750 IPR001965 -
Acco13g1457 1329 ProSiteProfiles Zinc finger PHD-type profile. 707 752 IPR019787 -
Acco13g1457 1329 CDD PHD2_CHD_II 710 749 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 544 561 - -
Acco13g1457 1329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 812 IPR013083 -
Acco13g1457 1329 Pfam PHD-finger 710 752 IPR019787 -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 258 359 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 1037 1051 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 1228 1248 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 27 78 - -
Acco13g1457 1329 Pfam Tify domain binding domain 632 682 IPR032308 -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 312 330 - -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 544 576 - -
Acco13g1457 1329 ProSitePatterns Zinc finger PHD-type signature. 710 749 IPR019786 -
Acco13g1457 1329 MobiDBLite consensus disorder prediction 270 293 - -
Acco13g1457 1329 SUPERFAMILY FYVE/PHD zinc finger 699 756 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1457 Acco-ChrAcco13 14815240 14821814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1457 4 1037 PHD Transcription Factor Family AT4G14920 47.970 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco13g1457 TDBD 7.5e-21 No_clan