Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1455 ATGGAATCGTGCATGAGATCGGCTGGCCATTCCGGGGTTTTAGAGAATAATAGGAAGTCCTCAGGCTGTTTAATTGTTAAAAAGAAAGGAGATGGATTGGGTGGTGGATTTGCTTCTTCGAGCAGTTCGCGGAAGCTGTATGAGTCAAAAGTTAGGAAAAGGTCCAGGGTGGCTAAGAGTGATTCAGAATCAAGTGACGAGTTGCCGATGCCTCCAATGAGAAGGCTTGGTTCTGAAACTATTCGTGTCTGTAATGGGTTGACTGCTTTTGAGCGGGGTATAGGAGAAAGGAGTGAAACTGGTAGAAAGAGGGATAGAACGGAGCAAATCAGACGTGATGAGGATTCTGTGTTATATAAGAATGGGATGGAGCAGAGGGAAACAAAGAGTAATAAGCTGGACGTGTTTGATTTTGATGAATATGATGGTTTCAATGCGCAAATGACTCAAAGGAGGAAGTCTCATGATGATAATGGAGTTATTAGTTTTGGAGGACGAAGGTTTAGGGAACCGATGCGGGAAGCTTCTAGTGGCATTGAGAGGGAATTTGAAACAGGGTCAAGTAGTCACATTGTTTATAGTAGAAAGAATTCTTATTATGGCAGGACTAGAGGCTTGGATCTAGGAGACAATATTAGTCAAAGCAGGTTAAAAACAAATGGGGTACCTCTGCTGAAAAATAAGTTTAAATCAGATGAATCCATCAGGGTTCAGGGGAAAAATGGTGTTCTAAAGGTGATGCTTAATAAGAAGAAGGCTAGCCCATCAGAGCACTATGGTCATCACAAACCTATGGAAAGAAGACAGAGTTTGAGGACTGAGGCCACTGCCAAGAAGAGCCCCTTGGCCCATCCTTCATCGTACTCAAAAACAAAATTTATTCAAAAGCCGGGTTTAGCTGTTAGACAAGAGGAAAAACCGATAGTATCAAAAAACTCATTTTCAACTAAGGACAATAAGGGCCGTGTTTGGGATACAGAGGACAGTGGCTCATCATCGAATCAGGAGTTAGAAACTACTAAAACTCGCAAGTCTTTGAAGAGGGCATGTTCTGAGGATGAGCAGACTCCTTTGCGGAAGAAAGTCCCGATTACGATTATGAAAGAAGGGAAAGTGAAGCGGGGTAGTGGCACCAAAAAACAGAAGCTGCGAGAAAAATTAAGGGAGATGTTACTGAGTGCAGGATGGACTATAGATTATCGGCCTCGAAGGAATAGAGACTATCTGGATGCAGTTTACATTAATCCAGGGGGTACAGCCTATTGGTCTATCATCAAAGCATATGATGCTCTGCAAAAGCAATTGAATGATGATGATGAGGCCAAGCCCATGGGTGGAAGTTCTTCCTTTGCTCGCATCTCAGATGAGGTGTTGAGTCAATTGACGAGGAAAACTCAGAAAAAGATGGAGAGAGAATTGAAGAAGAAGAAAATTTATGCTAGTGAAAGTGAGAGCGATAGTGAAAAAAAACCCATCCGTAAAAGATATTCCAGTGACAAGCGTGATATGAATAGCATGGATAGTGATAGCGATGAAGAGAAATTAAGCTCTTTTATAAAGCAGGGAAGTAAGTCAATGAAAAAGAAAATGACGGAAAATGTTGTTGCCAGTGCTAGCTTAAAATCCCGGAAATCTACCCGTTGCATACATGATGAAACTGACAATTCATTGTCTGAATGTGATCCTCATCAGTCACATGTGAGGAAAAGTAGAAAATTCGGAAGATGTACTTTGTTTGTTCGGAGTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGATTTGTTCCGTACACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTGGTATTGAGCCAAAAGGTTCAGTATCAGAAACGAAAACGAGTAATGTTGGAGGGATGGATTGCAAATGATGGCATTCATTGTCACTGCTGCAGTAAAATCCTCACTATCTCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCACCAGCCATTTCAAAACATATATTTGGATTCGGGAGTTTCTCTTCTACAGTGTCAAATAGATGCATGGAATAGACAGGAGAATTCTGAGAAAATTAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAATGATGACACTTGCGGTATATGTGGGGATGGTGGGGCCTTAATCTGTTGTGATGGTTGTCCATCAACATTTCACCAGAGCTGCTTGGATATTCAGATGCTTCCTCCTGGTGAATGGCTTTGTCCAAATTGCACCTGCAAATTATGTGGAATAGCCAGGGGGACTGTTAAAAAAGGAGGTGCTGCTGGATTTGCTCTACTCACTTGCAACTTATGTGAGAAAAAATACCATGAATCTTGTGCTGAGAATATGGATGCCCTTTCTATTAACTCCAATATACCGGGCTTTTCTTTTTGTGGGAAAGAGTGCAAACAGCTTTTTGAGCATTTGAAGAAGTACCTTGGTACCAAGCATGAGCTAGAGGGAGGATTTTCATGGTTTCTTACTCATAGAACAGATGATGATTCAGAGGCAGCTAGTAGGGGAATTTTTCAAAGGGTGGAATGCAACTCCAAGCTAGCTGTTGCACTTACTATCATGGATGAATGCTTTTTACCTGTTGTTGACCGGAGGAGTGGGATCAATTTAATTCATAATGTTTTATATAATACTGGGTCAAACTTCAGTAGGCTGAACTATAAGGGTTTTTACACTGCTATTTTGGAGAGGGGTGATGAACTAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAGGCTAGTGGAGATGCCATTTATTGGAACTCGCCACATATATAGGCGTCAGGGCATGTGCCGCCGGCTTTTTTCTGCTATTGAAATGGCCCTCCGCTCTATGAAGGTTGAGATAATGATTATTCCAGCAATTGCTGAGCTCATGCAAACCTGGACAACGAATTTTGGCTTCACACATCTTGAGGAATCACTGAAGCAAGAACTGAGGTTGTTGAATATTCTGGTGTTCCCTGGGATAAATATGCTACAGAAGGTGCTGGTAGAGAAAGGTGTTGAGAAAATGGAAAATGGAGATGAAGTTAGTATCAAGCCAATATTGGCGGATTGGTCAGATGATTCCTCAAATCAACAAGACCCTGATGGAAGTGATAACGATGATTCAAATCCTGTCAATGAGATAAATGATGACTGTATCGATGCTTCTCAAGAGATGAAAGATCAGGTTTCATCTGGCAGGACTGTGTGCCCCAAATCTAATTCCGAGGATAGGCTATCTGACTCGTCTGCAGGTAAATGTTCTTCTCCCTCTAGGACAAACCATAATGCCCTGGAGATGGAAAATCCTGCGGAAGATAATTTGAATGCATCTGGCAAAAGTCAGGTTATTTCTCTGAATGATACTTCTATTGATGTACATCGGGCTGATGCTCCGGATTGTCCTGAAAATAGTACTTTGGTTCCAGAAACTGCTCCCTCTGATCGTGATTTGACAGAAGACCTGGTTGAGCCTGTTTCTGATCAGAAAAGTCAATTGCCCACTGCTGTAAATGGTGATTCATCTGAGAATAAGATGAACCCAGTGGTGGATAATATGGTGTCACCTGGAGAGTTTGGCATGAATAATACTCAAGAGGTTCATAAGGTTGTTCCTTCAGGTGGGTTATTTGAAGAAAATATTACCACACGGAGCTCTGATTCTATTCTCAATCATGCTGATGAGAGTTCCTTGCGAATCAGTTCAGGTTTGAATAGTGAAACTGTGTGCCAAGAAAGAAACTTACACGTACACGTAGGCACAGAAGTTGCTTCAAAAAATAAGCCTTCTGATGAAAATGGCATCAATGCATCCAATGATTGTTCTGAGACTGATCAAGAGTAA 3864 0.4164 MESCMRSAGHSGVLENNRKSSGCLIVKKKGDGLGGGFASSSSSRKLYESKVRKRSRVAKSDSESSDELPMPPMRRLGSETIRVCNGLTAFERGIGERSETGRKRDRTEQIRRDEDSVLYKNGMEQRETKSNKLDVFDFDEYDGFNAQMTQRRKSHDDNGVISFGGRRFREPMREASSGIEREFETGSSSHIVYSRKNSYYGRTRGLDLGDNISQSRLKTNGVPLLKNKFKSDESIRVQGKNGVLKVMLNKKKASPSEHYGHHKPMERRQSLRTEATAKKSPLAHPSSYSKTKFIQKPGLAVRQEEKPIVSKNSFSTKDNKGRVWDTEDSGSSSNQELETTKTRKSLKRACSEDEQTPLRKKVPITIMKEGKVKRGSGTKKQKLREKLREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDDEAKPMGGSSSFARISDEVLSQLTRKTQKKMERELKKKKIYASESESDSEKKPIRKRYSSDKRDMNSMDSDSDEEKLSSFIKQGSKSMKKKMTENVVASASLKSRKSTRCIHDETDNSLSECDPHQSHVRKSRKFGRCTLFVRSSSKGLNSESGGFVPYTGKRTVLSWLIDSGTVVLSQKVQYQKRKRVMLEGWIANDGIHCHCCSKILTISKFEIHAGSKLHQPFQNIYLDSGVSLLQCQIDAWNRQENSEKISYHSVDIDGDDPNDDTCGICGDGGALICCDGCPSTFHQSCLDIQMLPPGEWLCPNCTCKLCGIARGTVKKGGAAGFALLTCNLCEKKYHESCAENMDALSINSNIPGFSFCGKECKQLFEHLKKYLGTKHELEGGFSWFLTHRTDDDSEAASRGIFQRVECNSKLAVALTIMDECFLPVVDRRSGINLIHNVLYNTGSNFSRLNYKGFYTAILERGDELISAASIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIEMALRSMKVEIMIIPAIAELMQTWTTNFGFTHLEESLKQELRLLNILVFPGINMLQKVLVEKGVEKMENGDEVSIKPILADWSDDSSNQQDPDGSDNDDSNPVNEINDDCIDASQEMKDQVSSGRTVCPKSNSEDRLSDSSAGKCSSPSRTNHNALEMENPAEDNLNASGKSQVISLNDTSIDVHRADAPDCPENSTLVPETAPSDRDLTEDLVEPVSDQKSQLPTAVNGDSSENKMNPVVDNMVSPGEFGMNNTQEVHKVVPSGGLFEENITTRSSDSILNHADESSLRISSGLNSETVCQERNLHVHVGTEVASKNKPSDENGINASNDCSETDQE 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1455 1287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 697 792 IPR013083 -
Acco13g1455 1287 Pfam PHD-finger 709 751 IPR019787 -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1027 1103 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 95 120 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 462 531 - -
Acco13g1455 1287 SUPERFAMILY FYVE/PHD zinc finger 698 757 IPR011011 -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 94 120 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1165 1187 - -
Acco13g1455 1287 PANTHER PHD FINGER PROTEIN 12 348 1114 IPR042163 GO:0003714|GO:0045892
Acco13g1455 1287 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 898 984 IPR016181 -
Acco13g1455 1287 CDD PHD2_CHD_II 709 748 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 462 518 - -
Acco13g1455 1287 SMART PHD_3 708 749 IPR001965 -
Acco13g1455 1287 SMART PHD_3 750 808 IPR001965 -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1030 1050 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1266 1287 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1 75 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1065 1103 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1134 1187 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 252 355 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 340 355 - -
Acco13g1455 1287 Pfam Tify domain binding domain 631 681 IPR032308 -
Acco13g1455 1287 ProSiteProfiles Zinc finger PHD-type profile. 706 751 IPR019787 -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 252 274 - -
Acco13g1455 1287 MobiDBLite consensus disorder prediction 1261 1287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1455 Acco-ChrAcco13 14789766 14798820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1455 6 1009 PHD Transcription Factor Family AT4G14920 48.145 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco13g1455 TDBD 6.2e-20 No_clan