Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1431 ATGATGATGGCGAATCATTTCCAGAACGGTATTGAAACAGCGAAGCTCGTTTGGTCGCGAATTCCGAACTTGGAGTCGGAGGAACCCCAGGACTCGGAAGACACCATTGGATTGTTGAAGAAGAGTGATGGAAGCGGCGTCGAGAGCCTTGACTATGAAGTCATAGAGAATTATGCTTACCGGGAAGAACAGGCGCTAAGAGGGAAGCTGTATGTGGGCTATTTGTTGGTGGTGAAATGGTTCTTTGCTTTGCTCATAGGCATTGGTACTGGAATTGCTGCTGTTTTCATCAATATATCTGTTGAAAACTTCGCTGGCTGGAAGTTTTCACTGACATTTCATATAATTCAGAAATCCTATATAGCGGGCTTTCTTGTATATGTCCTGATCAACTTAGTTTTGGTCTTATCCTCTGTATATATTATCACACAATTTGCTCCAGCAGCAGCTGGATCTGGTATTCCTGAAATTAAGGGTTACTTAAATGGAGTTGATATTTATGGCATCCTTCTTCTCAGAACCTTGATTGGAAAGATATTTGGAAGCATTGGTTCAGTCGGAGGTGGCCTTGCTTTAGGTAAAGAAGGCCCTCTTGTGCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGATCTACCAAGTATCATCTAAATTCTAGATGGTTTCAAGTATTCAAAAGTGATCGGGATCAGCGAGATCTTGTAACCTGTGGTTGCGCGGCTGGAGTAGCTGCCGCATTTAGAGCTCCTGTTGGTGGTGTTTTGTTTGCATTGGAAGAGGTAACATCATGGTGGAGAAGTCAATTGATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTCGTAGTGCGTACTGCAATGGGGTGGTGTAAGAGTGGAAAGTGTGGACATTTTGGCTCGGGTGGATTCATCATATGGGATATATCAGGTGGTCAAGAGGATTATTCTTTTGCTGAGTTACTGCCAATGGCTGTTATTGGGGTTATTGGAGGACTGCTAGGAGCCTTGTTTAATCAGCTTACTCTTTATGTGTCTTCTTGGCGTCAAAATCATCTGCACAGGAAAGGGGGCCGAGTCAAGATCATCGAAGCATGCCTTGTCTCCTTGTTAACTTCAGTTATTTCATTTGGTTTACCACTCCTAAGAAAATGTAGCCCGTGCCCTGAATCTGATCCTCATTCTGATTCTACCATTGAATGTCCTCGACCACCTGGAATGTATGGGAATTATGTAAATTTCTTCTGTAGCAAAGACAATGAATACAATGATCTTGCCACAATCTTCTTCAATACACAGGATGACGCCATAAGGAATTTGTTTAGTGCGAAAACAATACATGAGTACAGTCCCCATAGTTTATTAACCTTTTTGGTAATGTTTTATTCTCTAGCAGTTGTAACATTTGGTACAGCAGTTCCAGCTGGTCAATTTGTTCCTGGAATCATGATAGGATCAACATATGGACGTCTTGTTGGCATGCTTGTTGTAAAATATTATGGAAAGCTCAACATTGAAGAGGGAACGTATGCTTTATTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGAATGACAGTGTCTCTCTGTGTCATTATGGTTGAAATAACAAATAACTTACAGCTGTTACCTCTTATTATGCTTGTTCTCCTTATATCCAAGGCTGTCGGTGATGCTTTTAACGAGGGCTTCTATGAAGAGCAGGCACGACTTAAGGGAATTCCATTGCTGGAATCAAGGCCTAAATATGAGATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGCAGAAGGGTGGTTTCTTTCCCTCGTGTTGTCAAGGTTGCAGATGTAGTTTCCATTCTGCAGAGCAATGATCACAATGGCTTTCCTGTCATTGATCACACAAGAAATGGAGAATCACTTGTTATTGGATTAGTGCTTCGGAGTCATCTATTGGTAATTCTACAGTCAAAGGTTGATTTCCAGCATATTCCTATACCTGTTGATACCATAGGCATGACCAACCCGATAAGGCACCATTCTGATGAATTCACTAAGCCTATTTCTAGTAAAGGAATCTGTATAGATGATATACATCTAAATTCAGATGACTTAGAAATGTACTTAGATCTTGCCCCATTTTTGAACCCCTCACCATATATTGTACCCGAAGATATGTCTTTGACAAAGGTCTACAATCTTTTCCGCCAACTAGGTTTGAGGCATTTATTTGTTGTTCCACGACCGTCTCGGGTTCTTGGTTTGATAACCAGAAAAGATCTGTTGATTGAGGACACCAAAATTGTAAATACAATACAGCTCCAATCAACTAGCACAATGATTCTGCAGCAAGATGACCGGGGTTTAGGGTTTAGTGTTCTTCTTCAATGTACGCCAGCCCCAATCCATCTTCATCTGCTTCAGATTGGAGTGAAGAAGAATTCGTCGGAGTGGGCGGGGGCCGGCGGAGGAGCCAACGCGTAA 2472 0.4244 MMMANHFQNGIETAKLVWSRIPNLESEEPQDSEDTIGLLKKSDGSGVESLDYEVIENYAYREEQALRGKLYVGYLLVVKWFFALLIGIGTGIAAVFINISVENFAGWKFSLTFHIIQKSYIAGFLVYVLINLVLVLSSVYIITQFAPAAAGSGIPEIKGYLNGVDIYGILLLRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFQVFKSDRDQRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISGGQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYVSSWRQNHLHRKGGRVKIIEACLVSLLTSVISFGLPLLRKCSPCPESDPHSDSTIECPRPPGMYGNYVNFFCSKDNEYNDLATIFFNTQDDAIRNLFSAKTIHEYSPHSLLTFLVMFYSLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMLVVKYYGKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLQLLPLIMLVLLISKAVGDAFNEGFYEEQARLKGIPLLESRPKYEMRNMTAKEACGSRRVVSFPRVVKVADVVSILQSNDHNGFPVIDHTRNGESLVIGLVLRSHLLVILQSKVDFQHIPIPVDTIGMTNPIRHHSDEFTKPISSKGICIDDIHLNSDDLEMYLDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTKIVNTIQLQSTSTMILQQDDRGLGFSVLLQCTPAPIHLHLLQIGVKKNSSEWAGAGGGANA 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1431 823 Gene3D - 588 764 IPR046342 -
Acco13g1431 823 FunFam Chloride channel ClC3 71 388 - -
Acco13g1431 823 CDD CBS_pair_voltage-gated_CLC_euk_bac 598 758 - -
Acco13g1431 823 CDD ClC_6_like 48 579 - -
Acco13g1431 823 FunFam Chloride channel protein 703 788 - -
Acco13g1431 823 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 27 763 - -
Acco13g1431 823 SUPERFAMILY Clc chloride channel 57 581 IPR014743 -
Acco13g1431 823 SUPERFAMILY CBS-domain pair 584 758 IPR046342 -
Acco13g1431 823 Pfam CBS domain 599 651 IPR000644 -
Acco13g1431 823 Pfam CBS domain 712 758 IPR000644 -
Acco13g1431 823 SMART cbs_1 600 652 IPR000644 -
Acco13g1431 823 SMART cbs_1 714 762 IPR000644 -
Acco13g1431 823 PRINTS Plant CLC chloride channel signature 277 287 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco13g1431 823 PRINTS Plant CLC chloride channel signature 53 61 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco13g1431 823 PRINTS Plant CLC chloride channel signature 263 271 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco13g1431 823 PRINTS Plant CLC chloride channel signature 295 302 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco13g1431 823 PRINTS Plant CLC chloride channel signature 427 443 IPR002251 GO:0005247|GO:0006821|GO:0016020
Acco13g1431 823 ProSiteProfiles CBS domain profile. 597 657 IPR000644 -
Acco13g1431 823 Gene3D Clc chloride channel 73 580 - -
Acco13g1431 823 ProSiteProfiles CBS domain profile. 711 768 IPR000644 -
Acco13g1431 823 Pfam Voltage gated chloride channel 135 559 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 147 164 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 510 526 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 566 580 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 178 197 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 475 495 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 242 261 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Acco13g1431 823 PRINTS Chloride channel signature 528 547 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1431 Acco-ChrAcco13 14373120 14384232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1431 2 779 Ion Channels AT5G26240 82.074 0.0 1231