Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1407 ATGGCTTCATCTTCTTCCTTGTTCATAATAAAGCCATTTATTTGTTTCATCGTGTTGTTCTTGGCAGCATGCCCTAGTTATGTTCTTGGTATCACCGAGCTCAAAGATATTGTAATAGATTCTCCTCTATTAACAAAAAATATTCCGGCAAATCGAACCATTAAGGTCGATGATGACGGCAACGGAGAATTCACATCCATTCAGGCTGCCATAGATTCTATTCCTGAAGGAAATTCTCAGTGGGTCGTTGTCCATGTCAGGAAAGGAGTATACAGAGAGAAGGTGACGATACCAAAGAGCAAGCCATATATATTCTTGAGAGGAAATGGGAGAGGGAGAACTGCTATAGTTTGGTCTCAGAGTTCTGTTGATAATATAGAGTCTGCAACTTTCAAAGTCGAAGCTCATAACGTCGTTGTCTTTGGAATCAGCATCAAGAATGAGGCACCTACTGGGGTTGCTTATACTTCACAGAATCAATCAGTGGCAGTATTTGTAGGAGCAGATAAAGTGGCATTCTATCACTGTGCATTTTATAGCACTCACAACACTCTCTTTGATTACAAAGGCAGACATTACTATGATGAATGTTACATTCAAGGTTCTATTGATTTCATCTTTGGCCGTGGCAGATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGATAAGAGGACGGCGATAAAGGGGTCAATCACAGCACAAAGTAGAGAGTCAGAATCAGAGAAAAGTGGGTTTGTGTTTGTGAAGGGAAAGATATATGGCATAGGAGGAGTTTACTTAGGAAGAGCCAAAGGTTCTCATTCAAGGGTCATCTTTGCCAGAGTCTATCTCTCTGCCACCATTGTTCCTGAGGGCTGGGCCCACTGGAGTCATGCCGGCTCCACCGAGAACTTGTACCATGGCGAGTACAAGAACTTTGGACCCGGAGCTAACACAACAAAACGAGCTAGTTGGGCCAAACAACTTACTGATCAAGAAGTCGAACCCTTGATGTCTGTGGAATACATTGATGGCCAAGATTGGCTTCCTGCTTGGCTATAA 1047 0.425 MASSSSLFIIKPFICFIVLFLAACPSYVLGITELKDIVIDSPLLTKNIPANRTIKVDDDGNGEFTSIQAAIDSIPEGNSQWVVVHVRKGVYREKVTIPKSKPYIFLRGNGRGRTAIVWSQSSVDNIESATFKVEAHNVVVFGISIKNEAPTGVAYTSQNQSVAVFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGRSLFHKCEIFVIDDKRTAIKGSITAQSRESESEKSGFVFVKGKIYGIGGVYLGRAKGSHSRVIFARVYLSATIVPEGWAHWSHAGSTENLYHGEYKNFGPGANTTKRASWAKQLTDQEVEPLMSVEYIDGQDWLPAWL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1407 348 Pfam Pectinesterase 54 340 IPR000070 GO:0030599|GO:0042545
Acco13g1407 348 FunFam Pectinesterase 48 348 - -
Acco13g1407 348 SUPERFAMILY Pectin lyase-like 49 346 IPR011050 -
Acco13g1407 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Acco13g1407 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 344 - -
Acco13g1407 348 Gene3D - 48 347 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1407 Acco-ChrAcco13 14004969 14007374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1407 7 344 Carbohydrate Esterase AT5G47500 35.345 3.27e-73 229