Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1384 ATGGAGGAGAATCACAAGAGAGAACCAGACTTCAAGTCGTCTTCCTCTTCTGCCATGGCAACGACATTTTCCGATGAGCTTCTGAACAACCCCACCTTCTTCGATACGTCACCGTTTGGGTCCTACGATCATCGTCGTCATCATTATCATCAACCTGACGACAACAAAACTAGTAATCATAATTCCTATGGGTTCATGGACCTGCTGGGCGTTCAAGATTACGGTACTCCTTCTTTGTTCGATTGGCTTCCGGCCACTACCACAGCGTTGTCGTCGGTCGCAGCTGATGTAGCCCACCAGTCCCTCCCGTCACGGGCGACCTCAGGCGGGGTGCTGAACACTTCGGCCTCCCCGAATTCCTCCTCGCATTCATCCTCGTCCAACACTGCCGCTGCGGGAGCAGGCGGCAGTGTGGAGGAAGAACAGCAGAGTGGTAAAGCAGAGGATGAAGATGTGGACGACGGTGGAAGAGGGGACGACCAAGAACAAGACAAATCTAAGGAACAGGAGATGAAACCTAAAAAGAAGAAGCAAAAGAAGGAAAAAGAGCCAAGATTTGCGTTCATGACGAAAAGCGAGGTTGATCACCTAGACGATGGCTATAGGTGGCGTAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATCGATGCACGACGGTTGGTTGCGGAGTGAAGAAGAGGGTGGAGCGGTCGTCGGAAGATCCTGCCATCGTGGTGACAACCTACGAGGGGCAGCACAAGCATCCAAGTCCGGCGGCGGCTACTCGGGCCGGCCTGGTGAGGTATGGCGGGGGTTTTGGTTCGGTGAACTTGGTGGTTCCACAGCCTTATGAACATCATCATCATCATCATCAGTTCCAGCAGCAGAGCATAAATGCGTTGTCTTCTTCTTCTTCGCCAATGTTGTATAACTCAAGCAACTATGTCACAAATATGAACTCGTCGATGACGGCGGCGTCGTTTATGAGGTCGTACCATAACAGATCAGGTTTTGGAGGAGTAGGGTCGAGAATGGATGATGAAGCTAGTTTGTTAAGAGACAATGGGCTTCTTCAGGACATTATCGTACCATCGCAGATGATGAACAATGATGATCCAAAGCAGTTATAA 1128 0.5044 MEENHKREPDFKSSSSSAMATTFSDELLNNPTFFDTSPFGSYDHRRHHYHQPDDNKTSNHNSYGFMDLLGVQDYGTPSLFDWLPATTTALSSVAADVAHQSLPSRATSGGVLNTSASPNSSSHSSSSNTAAAGAGGSVEEEQQSGKAEDEDVDDGGRGDDQEQDKSKEQEMKPKKKKQKKEKEPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSEDPAIVVTTYEGQHKHPSPAAATRAGLVRYGGGFGSVNLVVPQPYEHHHHHHQFQQQSINALSSSSSPMLYNSSNYVTNMNSSMTAASFMRSYHNRSGFGGVGSRMDDEASLLRDNGLLQDIIVPSQMMNNDDPKQL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1384 375 SMART WRKY_cls 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1384 375 MobiDBLite consensus disorder prediction 158 188 - -
Acco13g1384 375 FunFam WRKY transcription factor 57 183 257 - -
Acco13g1384 375 MobiDBLite consensus disorder prediction 39 58 - -
Acco13g1384 375 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g1384 375 MobiDBLite consensus disorder prediction 108 188 - -
Acco13g1384 375 MobiDBLite consensus disorder prediction 40 55 - -
Acco13g1384 375 Gene3D WRKY domain 184 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco13g1384 375 Pfam WRKY DNA -binding domain 198 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1384 375 ProSiteProfiles WRKY domain profile. 192 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco13g1384 375 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 298 IPR044810 GO:0003700
Acco13g1384 375 MobiDBLite consensus disorder prediction 108 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1384 Acco-ChrAcco13 13461510 13463475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1384 59 258 WRKY Transcription Factor Family AT4G18170 46.305 8.48e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco13g1384 WRKY 1.5e-26 CL0274