Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco13g1354 | ATGTCAGACGTCGTCGTTTATGCCAAAACGCCGTTGTTGGCTGGTTGCGGAGACCCCGAAACGACCATCCTCCCCCGTCAAAACTCAATTCCAATTTCCGTTGAAGCTTTGAAGCCACCATTCTGGCCCCTCTCCGATCCGAGTCACCGAGTTCCGGGCAAAACTTTAGGGACAGGTCAGGCAGCATTTCCAATACCCTTTGCTGTTGCTTCGTGTGCAATGGTTCTCAAAAAATGCATTAGCTGCGCTAGTACTCTATGTTTATTTTTGCAGTCTGCTCCGGTGAACATTATTGTTGGCTCTCATGTCTGGGTTGAAGATTCAGCGCAAGCATGGATTGATGGAGAAGTTTTCAAAATCAAGGGTGAAGAAGTCCATGTTCGCACCTCAGATGGAAAGACAGTTGTCACAGATATGTCAAAGGTTTTTCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTTGATGACATGACTAAACTGTCATATTTGCATGAGCCAGGAGTTCTGCACAACTTGGCAACAAGATATGAGCTAAATGAAATCTATACATATACTGGAAATATCTTGATTGCCATAAACCCATTTCAAAGATTACCCCATCTGTATGATACTCACATGATGGAACAGTACAAAGGAGCTTCATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGAGCAATGATCAATGAGGGTAAAAGCAACTCAATCTTGGTCAGTGGTGAAAGTGGTGCTGGTAAGACAGAGACAACGAAGATGCTCATGCGATATCTTGCTTACCTAGGGGGGCGATCTGGAGTAGAAGGACGAACAGTTGAACAGCAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTCGAAATAATAACTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACCACAAGGGAAGAATCTCAGGGGCAGCCATACGTACTTACCTGCTCGAGAGGTCTCGTGTTTGCCAAATTTCTGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTTTGTGCTGCAACAGCTGAGGTAAAAGAAAAGTATAAGCTACAAAGTCCTAGTTCCTTCCATTACTTAAATCAATCAAAGTGCTATGAATTGGATGGAGTAGATGATGCAGAGGAATATCTTGCTACTCGAAGGGCAATGGATATTGTTGGAATTAGTGAGGAAGAGCAGGATGCAATTTTTAGGGTCGTGGCAGCAATTCTTCACCTTGGAAATATTGACTTCTCAAAAGGAGAGGAAATCGACTCCTCTGTCATCAAAGATGAGAAATCTAGATTCCATCTTAACATGACAGCTGAACTTCTTAAATGTGATGCCAAGAGCTTGGAAGATGCATTGATCAAACGTGTGATGGTAACACCTGAGGAAGTTATCACAAGAACCCTAGATCCTATTGCAGCTGTTGGTAGCAGGGATGCGCTGGCTAAAACCATTTATTCTCGCTTATTTGATTGGCTTGTGGAAAAAATTAACAACTCAATAGGGCAAGATCTGAATTCAAAATCTATCATTGGAGTTCTTGATATCTATGGATTTGAAAGTTTTAAGTTCAACAGTTTTGAACAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTTGATAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCCGGAGGAATAATAGCACTCCTTGATGAAGCCTGTATGTTTCCCAAGTCCACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCCAAACTTTCTCGTACTAGTTTCTCCATAAGTCATTATGCAGGGGAGGTACTGTACCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTTGCAGAACACCAGGCTCTACTGACAGCCTCAAAATGCTTGTTTGTGGCTGGTCTATTCCCACCTTCCCAAGAGGAATCATCAAAATCATCCAAGTTCTCTTCTATTGGATCACGTTTTAAGTTACAACTTCAATCTTTGATGGAGACCTTAAGTTCAACAGAGCCTCACTATATCAGATGTGTGAAACCAAACAATGTCCTCAAGCCTGCTATTCTTGAAAATGTCAACATTATCCAGCAATTACGCTGTGGTGGTGTGCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACTAGACGAACCTTTTATGAGTTTCTTAACCGATTTGGTGTTCTTGCCCCTGAAGTTTTGGAAGGAAACTATGACGACAAAGTCGCATGCCAAAGAATACTAGATAAAATGGGTTTGAAAGGCTACCAGATTGGCAAGACAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCTGTGGTGCTTGGAAATGCTGCAAGAACCATCCAAAGACAAATACGCACCTATATTGCACGCAAGGAGTTCATTGAATTGCGGCGAGCCGCAATTTATTTGCAATCTAACTTGCGAGGCATATTAGCTAGGAAGCTGTTTGAGCAGTTGCGGCGTGAAGCAGCAGCTGTGAAGATAGAGAAGAACTTCAGAGGATACACTGCAAGGAAATCTTACCTAACAGTACGATCATCTGCTATCATATTACAGACAGGATTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCCGCAATTCTCATACAGGCTCGTGTGCGTCAACACATTGCACATTCTTATTACAGAAGATTGCAGAAGGCTGCAATTGTTACTCAATGCAGTTGGAGACAAAGGGTTGCTCGGAGGGAACTCAGAAAACTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTCAAGAAGCAAAGAACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTACAAATTGAGAAGCGTTTGAGAACCGACTTGGAAGAGGAGAAAGCACAAGAAATTGCCAAGTTAAAGGATGCATTGCATGCTATGCAAATACAAGCAGAAGAAGCAAATGCCAAAGTCCTCAAAGAACGTGAGGCTGCTCGGAAAGCAATCGAAGAAGCACCTCCAGTTATCAAGGAGACTCCTGTCATAATTCAGGATACTGAAAAGCTTAATTCCTTAATGGCTGAGGTCAAAAGTTTGAAGGAGTCTCTGGTAACAGAAAGAGAGGTGAAAGAAGAGGCCAGGAAAGCTCGTGCAGATGCTGAGGCTAGAAACGCTGAGCTGGTTAAGAAAGTAGAAGATTCTGGTCGCAAAGTGGATCAACTTCAGGAACTGGTTCAGAGATTGGAAGACAAAATTTCCAATTCAGAGTCAGAAAACCAGGTTCTTCGCCAGCAAGCATTGGCTGTATCACCAAAAGCTCTATCTGCAAGACCAAGGACTGTGATTATACAGAGGACACCAGAAAATGGAAATGCTGTAAATGGAGAATCAAAACCTGCAACAGACATGACTCTTGCTGTATCCAATGTCCGTGAACCTGAATCTGAAGGAAAGCCACAAAAATCTCTCAACGAGAAACAGCAAGAAAACCAGGACTTGTTGATCAAATCCATATCGCAAGATTTGGGATTTTCTGGGGGTAAACCTGTTGCTGCATGCATGATCTATAAATGCCTTCTTCACTGGAGATCATTTGAAGTCGAAAGAACAACTGTTTTTGACCGTATTATTCAAACTATATCTTCAGCAGTTGAGGCGCAGGATAATGCTGATATATTAGCCTACTGGTTGTCTAATACATCAACTTTGTTGTTGCTTCTCCAACGAACTCTCAAAGCAAGTGGGGCAGCTAGCTTAACACCACAAAGGCGAAGAACAACGTCAGCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGAGCAGCTCCTCAAAGTGCTGGTTTACCATTTCTAAATGGCAGAGGGCTCAGTAGACTGGATGATTTAAGGCAAGTGGAAGCAAAATATCCCGCTCTGCTATTCAAGCAGCAGCTTACTGCCTTCTTGGAAAAAATATATGGAAATATAAGAGACAACCTTAAGAAGGAGATATCTCCATTGCTCGGATTGTGTATCCAGGCTCCAAGGACTTCACGTCAAGGTTTAGTGAAAGGACGCTCACATGCCAATGCAGTGGCACAACAAGCTTTAATTGCTCACTGGCAAAAAATTGTGAACAGCTTAAACAACTCTCTAAAAATGATGAAAGCAAACTATGTGCCCCCATTCTTGGTCTGTAAAGTGTTTACTCAAATATTCTCATTCATTAATGTTCAACTATTCAACAGTCTTCTGTTGCGTCGTGAGTGTTGTTCATTCAGTAATGGAGAGTACGTAAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCAATGAGGCAACAGAGGAGTATGCTGGTTCAGCTTGGGAGGAACTGAAGCATATCAGGCAGGCTGTTGGGTTCCTGGTGATACATCAAAAGCCCAAGAAGACCTTGAATGAAATAACAAAGGAGCTTTGCCCTGTTCTTAGCATACAACAGTTATACAGAATCAGTACAATGTACTGGGATGATAAATATGGCACGCACAGTGTGTCTACAGATGTTATTGCAAAAATGAGAGTCATGATGTCTGAAGACTCTGGCAATGCTGTCAGCAGCTCATTCCTACTGGATGATGACTCAAGCATTCCATTCTCAGTAGATGACATCTCTAAATCCATGCAACAAGTTGATGTATCCGATGTGGATCCTCCTCCATTAATCCGTGAGAACTCAGGATTTGGGTTCCTTCTAGCACGGTCAGAGTGA | 4857 | 0.4186 | MSDVVVYAKTPLLAGCGDPETTILPRQNSIPISVEALKPPFWPLSDPSHRVPGKTLGTGQAAFPIPFAVASCAMVLKKCISCASTLCLFLQSAPVNIIVGSHVWVEDSAQAWIDGEVFKIKGEEVHVRTSDGKTVVTDMSKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGASFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDHKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAATAEVKEKYKLQSPSSFHYLNQSKCYELDGVDDAEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIDFSKGEEIDSSVIKDEKSRFHLNMTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPIAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDLNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFSISHYAGEVLYQADMFLDKNKDYVVAEHQALLTASKCLFVAGLFPPSQEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAILENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLEGNYDDKVACQRILDKMGLKGYQIGKTKVFLRAGQMAELDARRAVVLGNAARTIQRQIRTYIARKEFIELRRAAIYLQSNLRGILARKLFEQLRREAAAVKIEKNFRGYTARKSYLTVRSSAIILQTGLRAMKARDEFRFRKQTKAAILIQARVRQHIAHSYYRRLQKAAIVTQCSWRQRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLKDALHAMQIQAEEANAKVLKEREAARKAIEEAPPVIKETPVIIQDTEKLNSLMAEVKSLKESLVTEREVKEEARKARADAEARNAELVKKVEDSGRKVDQLQELVQRLEDKISNSESENQVLRQQALAVSPKALSARPRTVIIQRTPENGNAVNGESKPATDMTLAVSNVREPESEGKPQKSLNEKQQENQDLLIKSISQDLGFSGGKPVAACMIYKCLLHWRSFEVERTTVFDRIIQTISSAVEAQDNADILAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTTSASLFGRMSQGLRAAPQSAGLPFLNGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGNIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQKIVNSLNNSLKMMKANYVPPFLVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCNEATEEYAGSAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVIAKMRVMMSEDSGNAVSSSFLLDDDSSIPFSVDDISKSMQQVDVSDVDPPPLIRENSGFGFLLARSE | 1618 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco13g1354 | 1618 | Pfam | Myosin head (motor domain) | 154 | 810 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 123 | 875 | IPR027417 | - | |
| Acco13g1354 | 1618 | FunFam | Myosin 2 | 402 | 520 | - | - | |
| Acco13g1354 | 1618 | Pfam | Myosin N-terminal SH3-like domain | 99 | 138 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | CDD | MYSc_Myo11 | 166 | 810 | IPR036018 | - | |
| Acco13g1354 | 1618 | SMART | iq_5 | 824 | 846 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | SMART | iq_5 | 872 | 894 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | SMART | iq_5 | 847 | 869 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | SMART | iq_5 | 895 | 917 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | SMART | iq_5 | 943 | 965 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | SMART | iq_5 | 920 | 942 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | PRINTS | Myosin heavy chain signature | 519 | 547 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | PRINTS | Myosin heavy chain signature | 572 | 600 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | PRINTS | Myosin heavy chain signature | 182 | 201 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | PRINTS | Myosin heavy chain signature | 239 | 264 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | PRINTS | Myosin heavy chain signature | 286 | 313 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | FunFam | Myosin heavy chain | 342 | 397 | - | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 897 | 925 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | Gene3D | - | 923 | 972 | - | - | |
| Acco13g1354 | 1618 | Gene3D | - | 875 | 922 | - | - | |
| Acco13g1354 | 1618 | Gene3D | - | 825 | 874 | - | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 848 | 877 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | FunFam | unconventional myosin-Va | 924 | 971 | - | - | |
| Acco13g1354 | 1618 | Pfam | DIL domain | 1437 | 1540 | IPR002710 | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 827 | 851 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | ProSiteProfiles | Myosin motor domain profile. | 152 | 822 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | FunFam | Myosin XI D | 757 | 820 | - | - | |
| Acco13g1354 | 1618 | SMART | MYSc_2a | 146 | 823 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | CDD | MyosinXI_CBD | 1201 | 1584 | IPR037975 | GO:0007015 | |
| Acco13g1354 | 1618 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 402 | 691 | - | - | |
| Acco13g1354 | 1618 | Gene3D | - | 342 | 400 | - | - | |
| Acco13g1354 | 1618 | Gene3D | - | 529 | 713 | - | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 944 | 973 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | PANTHER | MYOSIN | 148 | 1549 | - | - | |
| Acco13g1354 | 1618 | Coils | Coil | 967 | 1047 | - | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 98 | 147 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco13g1354 | 1618 | Gene3D | Kinesin motor domain | 155 | 752 | IPR036961 | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | Dilute domain profile. | 1250 | 1561 | IPR002710 | - | |
| Acco13g1354 | 1618 | FunFam | Class V myosin | 529 | 674 | - | - | |
| Acco13g1354 | 1618 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 875 | 973 | IPR027417 | - | |
| Acco13g1354 | 1618 | Coils | Coil | 1072 | 1141 | - | - | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 873 | 899 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | FunFam | unconventional myosin-Va | 876 | 923 | - | - | |
| Acco13g1354 | 1618 | FunFam | unconventional myosin-Va | 827 | 875 | - | - | |
| Acco13g1354 | 1618 | Gene3D | - | 757 | 823 | - | - | |
| Acco13g1354 | 1618 | SMART | DIL_2 | 1436 | 1543 | IPR002710 | - | |
| Acco13g1354 | 1618 | Pfam | IQ calmodulin-binding motif | 827 | 845 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | Pfam | IQ calmodulin-binding motif | 849 | 868 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | Pfam | IQ calmodulin-binding motif | 922 | 942 | IPR000048 | GO:0005515 | |
| Acco13g1354 | 1618 | ProSiteProfiles | IQ motif profile. | 921 | 947 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco13g1354 | Acco-ChrAcco13 | 13008296 | 13022780 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco13g1354 | 157 | 1618 | Myosins gene family | AT5G20490 | 82.309 | 0.0 | 2494 |