Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1349 ATGAATAGAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCTGTACTTGATCAAGTATTCTTGACTGAGAGCACGACCTTCAGGGAAGGCGATCTTCTGGTCAATAAGTATGGCGTTCGAATTATCTCTCAGAATGAAGTTGAAGCTCTACCCCCTATCAAGGGACCAGACAACCAGTTAAGTTTAGAAGACATAGACGCAATCAAAGTGGTTGGAAAGGGAAGCAGTGGTATTGTGCAATTGGTGCAACACAAATATACTAATCAGTTTTTTGCATTGAAGGTAATTCAAGTGACTATTGACGAGCCTATGCGCAAGCAGATAGCACAAGAGCTGATAATTAATCAATCAGCTCAATGTCCCTATGTCGTTGTCTGTCACCAGTCTTTCTATTTAAATAATGTTATATCAATCGTCTTAGAGTACATGGACGGAGGGTCTCTGGAAGATTTTCTCAAGAGAGTGAAATCAATTCCAGAGGAACATCTTGCTGCTATTTGCAAGCAGGTGCTGAAGGGTTTAACGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATTATGGAAAGTACATCTGGTCAAGCGAACACTCTCATTGGAACACGTATCTATATGTCTCCAGAGAGAATCAATGGATTCCAGCGAGGCTACAACTACAAATGTGACATATGGAGTTTGGGACTAATCATGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCGCCTGATCAAGGAGAAAGATGGGAAAATGTATTTCAGCTTATTGAAGCTGTTGTTGAAACTCCTCCTCCCTTAGCTCCACCTGATCAATTTTCTCCGGAGTTCTGCTCATTTGTTTCAGCATGTTTGCGGAAAAATCCAAAGAACAGATGGTCAGCTCAAGAACTTTTGAGACATCCATTTATCAATATGATCTCCCCTTGCTACTCTATAAAACTTACTAGAATCACTCCTCGTCAGCAGATTAGAGTCACAGAAACCATCTTCTATGAAAGAAGCTTTATTTGA 1086 0.4061 MNRGSLGPNLKLTVPVLDQVFLTESTTFREGDLLVNKYGVRIISQNEVEALPPIKGPDNQLSLEDIDAIKVVGKGSSGIVQLVQHKYTNQFFALKVIQVTIDEPMRKQIAQELIINQSAQCPYVVVCHQSFYLNNVISIVLEYMDGGSLEDFLKRVKSIPEEHLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTLIGTRIYMSPERINGFQRGYNYKCDIWSLGLIMLECATGRFPYTPPDQGERWENVFQLIEAVVETPPPLAPPDQFSPEFCSFVSACLRKNPKNRWSAQELLRHPFINMISPCYSIKLTRITPRQQIRVTETIFYERSFI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1349 361 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1349 361 Pfam Protein kinase domain 69 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1349 361 SUPERFAMILY Protein kinase-like (PK-like) 60 338 IPR011009 -
Acco13g1349 361 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Acco13g1349 361 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1349 361 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 330 - -
Acco13g1349 361 FunFam Mitogen-activated protein kinase kinase 1 48 145 - -
Acco13g1349 361 FunFam mitogen-activated protein kinase kinase 3 146 339 - -
Acco13g1349 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Acco13g1349 361 CDD PKc_MAPKK_plant_like 64 332 - -
Acco13g1349 361 Gene3D Phosphorylase Kinase; domain 1 39 145 - -
Acco13g1349 361 Gene3D Transferase(Phosphotransferase) domain 1 146 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1349 Acco-ChrAcco13 12909857 12913806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1349 1 323 MAP Kinase Kinase Gene Family AT4G29810 63.095 1.25e-153 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Acco13g1349 Pkinase 2.1e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1349 13 12909857 12913806 Acco13g1349 13 12909857 12913806 ECH