Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1334 ATGACATTCAAGCACGTGGTGTACCTGAAGTTCAGAGATGCTGTGAGGTATGAAGCAGCTTACCTGGATACATCTTCGTGCGTGAATTGGGCAGCAGGAGGTCATCTTTATGCCGTGGCTGGTGACTTGACGGCTGACCAGTTAAAATCTCAGTGTCGAGTGAAATCGGTGGTCACCATAGCGTCAGATTGGGATTCAATGGTTGGTGGAGGAATCAAGTCGTACGCTGAGATTCACTCCGTGCTTTCCTTTGGATTTGAGCTTTTATGGTGGCAACGAGCTTGTGCTGATTTTAAATGCCCAAGTGATCATACATGCTCTTTGACCCTTGAAACTCTCAGTCTCGCATGCGTTGAGTCTGGGAATATCTGTTACAGTCCTATGGGAGTAACATCAAGAACAAAATGCAGTGCTTATTCAAAACTACGGATATTGGCAGAAGATTATCTTTATGGAATGCTAAAAGGATTGTTCCAAGTAGCAAGGAAGGGAATAGGCGATCATCACGTTGAAACGGATTTTATTCTAACAAATGCTACAATCAAATTGGGAATAATTACCGAAAATGGCGTTGTGCCATACGTCACAGTCAGGTTTTCCATTGGTATCATATTATTATCCATTTTTTTGATCTATACATACCGTAGAAGGCACATGTCAATGTTCGAAAACATTGAAGCTTTCATACGAGTTCACAACCTTATTCCAATAAGGTACTCCTATAAGGATTTGAAGACAATTACAAAAGGTTTCAGCGTTAAGTTAGGTGAAGGAGGCTTTGGCATTGTATACAAGGGGAAATTAAAGAGTAGATATGATGTTGCTATCAAAATGTTGGGTAAATCTAAAGCTAATGGCCAAGACTTCATCAGTGAAGTGGCAACTATTGGAAGGATTCACCATGTTAATGTGGTACACCTTGTTGGATTTTGTGTGGAAGGAACAAAGCGAGCTCTTGTCTATGAATTCATGTCTAAGGGATCATTGGATAAATATATTTTTTCTAAACAAGAAAGCATTTCCTTGAGTTATCACAAGATATATGAGATATCACTAGGAGTGGCTCATGGGATCGATTACCTTCATCATGGATGTGATATGCAAATATTGCATTTTGATATCAAGCCCCATAACATTCTTCTTGATGACAACTTCATTCCAAAGATTTCAGATTTTGGCCTAGCAAGATTATATCATGTTGATAATAGTATTGTAACTTTAACCACAGCAAGAGGAACAATAGGGTATATGGCTCCAGAATTATTCTACAAGAATATCGGGGGAGTGTCATATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCTGGTCGAAGAAGGAATTTGAATCCACATTGTGAACATTCAAGTCAACTTTACTTTCCTTTGTGGATTTACGACCAGTTTGATGAAGAAAATGATATAAAAATGGAAGATTTGACTGAAGAGGAAAAGAATTTAGCAAAGAAAATGTTCATAGTGGCACTATGTTGTATCCAATTAAAGCCTGCTGATCGCCCTTCAATGGGTAAAGTAATAGAGATGCTAGAAACAGATGATGTTTCAAGTCTTGAAATGCCTCCAAAACCCTCTTTGTATCCTAATGAACAAGTTTTGGTGAATAATGGATCCTCATCTAGCCAAGCAACATCCACTATCTCTCTACATTATTCTCCTAGTAGTTTAGGTGAAGGCGCAAGTTGTGGGACATGA 1722 0.3879 MTFKHVVYLKFRDAVRYEAAYLDTSSCVNWAAGGHLYAVAGDLTADQLKSQCRVKSVVTIASDWDSMVGGGIKSYAEIHSVLSFGFELLWWQRACADFKCPSDHTCSLTLETLSLACVESGNICYSPMGVTSRTKCSAYSKLRILAEDYLYGMLKGLFQVARKGIGDHHVETDFILTNATIKLGIITENGVVPYVTVRFSIGIILLSIFLIYTYRRRHMSMFENIEAFIRVHNLIPIRYSYKDLKTITKGFSVKLGEGGFGIVYKGKLKSRYDVAIKMLGKSKANGQDFISEVATIGRIHHVNVVHLVGFCVEGTKRALVYEFMSKGSLDKYIFSKQESISLSYHKIYEISLGVAHGIDYLHHGCDMQILHFDIKPHNILLDDNFIPKISDFGLARLYHVDNSIVTLTTARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGRRRNLNPHCEHSSQLYFPLWIYDQFDEENDIKMEDLTEEEKNLAKKMFIVALCCIQLKPADRPSMGKVIEMLETDDVSSLEMPPKPSLYPNEQVLVNNGSSSSQATSTISLHYSPSSLGEGASCGT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1334 573 Gene3D Transferase(Phosphotransferase) domain 1 324 529 - -
Acco13g1334 573 Gene3D Phosphorylase Kinase; domain 1 226 323 - -
Acco13g1334 573 Pfam Protein tyrosine and serine/threonine kinase 253 519 IPR001245 GO:0004672|GO:0006468
Acco13g1334 573 FunFam serine/threonine-protein kinase PBS1-like 219 323 - -
Acco13g1334 573 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Acco13g1334 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Acco13g1334 573 SMART serkin_6 249 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1334 573 FunFam PR5-like receptor kinase 324 531 - -
Acco13g1334 573 ProSiteProfiles Protein kinase domain profile. 249 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1334 573 PANTHER RUST RESISTANCE KINASE LR10-RELATED 220 543 IPR045874 GO:0004672
Acco13g1334 573 SUPERFAMILY Protein kinase-like (PK-like) 233 520 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1334 Acco-ChrAcco13 12617881 12623171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1334 203 559 Receptor kinase-like Gene Family AT4G18250 45.699 3.45e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco13g1334 PK_Tyr_Ser-Thr 3.4e-47 CL0016