Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1333 ATGGTGAGAACCAGCAGCTTAGGAGTAGAGGATCCAGAAGGTCCGGTTGTGCTGGCTTCGCTTTTGATTGTGTGCGTTGGCATATGCATCTACGTCAAGAAGAAACGAGATGATCAAGTAAGACTTGAAAAGTTTTTGAAGGATTACAAGGCACTTAAACCTACCAGATTCTCTCATGGCGATATTAAAAGAATCATAGGCCACTTCAAGCATGAATTAGGTGAAGGTGCGCATGGAACAGTCTTCAAAGGTAAGCTCCCTACTGATATTCAAGTGGCTGTCAAACTACTCAATAATAACGATATAAAAGACTTCATTAATGAAACGGGAACAATGGCCAAAATTCATTACAGCAATGTTGTTCGTTTATTGGGCTTTTGA 381 0.4042 MVRTSSLGVEDPEGPVVLASLLIVCVGICIYVKKKRDDQVRLEKFLKDYKALKPTRFSHGDIKRIIGHFKHELGEGAHGTVFKGKLPTDIQVAVKLLNNNDIKDFINETGTMAKIHYSNVVRLLGF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1333 126 SUPERFAMILY Protein kinase-like (PK-like) 52 126 IPR011009 -
Acco13g1333 126 Pfam Protein tyrosine and serine/threonine kinase 69 125 IPR001245 GO:0004672|GO:0006468
Acco13g1333 126 ProSiteProfiles Protein kinase domain profile. 67 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1333 126 Gene3D Phosphorylase Kinase; domain 1 32 126 - -
Acco13g1333 126 PANTHER OS07G0415500 PROTEIN 18 126 - -
Acco13g1333 126 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1333 Acco-ChrAcco13 12588423 12589242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1333 19 126 Receptor kinase-like Gene Family AT5G38260 35.135 1.56e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco13g1333 PK_Tyr_Ser-Thr 3.7e-09 CL0016