Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1330 ATGAGCCTGGTATGGGTGCTGCTTCAGAAACAAGGGAATGGTGAGGACCAGCAGGTTCAGTTGCCGTCTATTCCTGACGCTCTTCAAGGACTCAATCTCTCCGTAAGTTACATAGACAATGAATCCCACTTCATATACGTGTCCTTAACAGATCCAGAAGATTGTCTTGCCAGACTCATTCTACAACGCCGTCTCTACATTTCGTCCATTTATTATCCTTTCGAGTATGCTTATGAGACTGAAGACAATGTTACATTCTTCAACTGTTCTTCCGCCGGATCCAGATATGACTCCGGATCCTGCCCCATTCTTGCTCTTGGCTCCCAGGAAAGTGTCCTGTCAAGGGACAATAACCTTACTTTCTGCACCATGATCTCACGATTACGTTCGCCAATACCGACATACTATCTTCAGTTCAATGAACTTTACCTCAGATGGAACTTCCAACCAAAAGTTGAAAACCACCACAAAACCAGAATTATTTTATCAAGCACAGGTTCCATTGTTCTGCTTTTGCTGTTGGTTGTGTGCTTCTACATATGCCGCTACTTCAAGCACAAAGGCGAAGACCAAGTCAGACTTGAAACGTTTTTGAAGGATTACCAGGCACTTAAGCCTACCAGATTCTCTTATGCTGATATTAAAAGAATCACTCACAAATTCAAGGATAAATTAGGTGAAGGTGCACATGGAACTGTCTTTAAAGGTAAGCTATCTACTGAAATTCAAGTGGCTGTCAAAGTACTCAATAATTCAGATCATGATGGAAAAGACTTCATTAATGAAATGGGGACTATGGGCAAAATTCATCACATCAATGTTGTTCGTTTGTTGGGATTTTGTGCTGATGGCTGTCGCCGAGCTCTTGTTTATGACTTCTTTCCTAATGGTTCCCTCCAAAAGTTCATCTCTTCCCCGGACAACAAAGAAATTTTCTTGGGATGGTCAAAGCTGCAACAAATTGCTCTTAATATAGCAAAGGGGATTGAATATCTTCACCAAGGCTGTGATTATAGAATCCTTCATTTTGATATCAATCCTCGTAATGTGTTATTAGATAACAATTTCACCCCGAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAGATCGAAGTACTGTATCAATGACTGCAGCAAAAGGAACCTTAGGATATATTGCACCAGAGGTTTTCTCTCGAAACTTTGGAAATGTGTCATACAAATCAGATATTTATAGTTATGGAATGCTGCTCTTAGAAATGGTTGGTGGAAGAAAAAATGTTGACACAAATCAAGTTCTATATCCTGAATGGATCCACAGCTTGATTGAAGGAGGAGACGTAAGTGTTTATATAGAAGATGAAGTTGACATTAGACTTGCTAAGAAACTAGCAATTGTAGGACTTTGGTGTATTCAATGGCATTCAATAAATCGTCCATCCATGAAAACAGTGATACAAATGCTGGAAGGAGAAGTAGATAAATTAAAAGTGCCTCCTACTCCTTTTGATTTCACTACTTCAACCAATACAAATACTGTTATTCCAGCAAGACATTTGAATTTAGAGTTAGACGTGATTCATGAACTAGAATAA 1581 0.3903 MSLVWVLLQKQGNGEDQQVQLPSIPDALQGLNLSVSYIDNESHFIYVSLTDPEDCLARLILQRRLYISSIYYPFEYAYETEDNVTFFNCSSAGSRYDSGSCPILALGSQESVLSRDNNLTFCTMISRLRSPIPTYYLQFNELYLRWNFQPKVENHHKTRIILSSTGSIVLLLLLVVCFYICRYFKHKGEDQVRLETFLKDYQALKPTRFSYADIKRITHKFKDKLGEGAHGTVFKGKLSTEIQVAVKVLNNSDHDGKDFINEMGTMGKIHHINVVRLLGFCADGCRRALVYDFFPNGSLQKFISSPDNKEIFLGWSKLQQIALNIAKGIEYLHQGCDYRILHFDINPRNVLLDNNFTPKISDFGLAKLCSKDRSTVSMTAAKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDTNQVLYPEWIHSLIEGGDVSVYIEDEVDIRLAKKLAIVGLWCIQWHSINRPSMKTVIQMLEGEVDKLKVPPTPFDFTTSTNTNTVIPARHLNLELDVIHELE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1330 526 PANTHER RUST RESISTANCE KINASE LR10-RELATED 193 503 IPR045874 GO:0004672
Acco13g1330 526 SUPERFAMILY Protein kinase-like (PK-like) 202 485 IPR011009 -
Acco13g1330 526 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Acco13g1330 526 Pfam Protein tyrosine and serine/threonine kinase 220 483 IPR001245 GO:0004672|GO:0006468
Acco13g1330 526 FunFam serine/threonine-protein kinase PBS1-like 188 293 - -
Acco13g1330 526 Gene3D Transferase(Phosphotransferase) domain 1 294 494 - -
Acco13g1330 526 ProSiteProfiles Protein kinase domain profile. 219 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1330 526 FunFam PR5-like receptor kinase 294 495 - -
Acco13g1330 526 Gene3D Phosphorylase Kinase; domain 1 195 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1330 Acco-ChrAcco13 12540962 12542620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1330 161 497 Receptor kinase-like Gene Family AT1G66910 45.042 1.04e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco13g1330 PK_Tyr_Ser-Thr 1.4e-45 CL0016