Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1305 ATGGCTCCGAGAATCTTACTATGCGGCGACGTCATGGGCCGCCTCAACCAGCTCTTCAAGCGTGTCTCATCTGTCAATAAATCGGCTGGTCCTTTCGATGCTCTTTTCTGCGTGGGTCAATTCTTCCCGGAATCTCCTGACCAGCTGGACGAGTTCATGGACTACATTGAGGGTCGAACGCAGGTTCCTCTTCCGACTTACTTCATCGGCGACTATGGCGTCGGTGCGCCTAAAGTTTTATTAGCAGCTTCTAAGGACCCGGCGAACCGTGGCTTCAAAATGGATGGCTTGAGGATTTGCGATAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCACCCTCTTGGGGTTATCTGTGGCCTATTTATCTGGCAGACAATCACCAGATGCTCAACAGTATGGAGTTTACAGTCAAGATGATGTTGATGCTTTGAGAGCAATAGCTGAGGAACCTGGAATAGTAGACTTTGGGGTCACAAATAGAGCAAATGCTTCAGACATTCCTGCTGGCCTATCAGATTCCATGGGTAGTGATTCAATCATAGCAGAGTTGGTGGGAGAGATTAAACCGCGTTATCACATTGCAGGCAGTAAAGGCATATACTATGCCCGTGAACCTTATTCTAATATTGAAGCAGTGCATGTGACTCGTTTCATAGGGCTTGCTACTGTTGGAAATAAAGATAAGCAGAAATTTATTCACGCAATTTCTCCCACGCCTGCATCCAGCATGTCCTCAACTGATATTGCGATGAAAACCACTAATACCACCTTATCGCCATATACATTTGTGGAGAAAAGAACTTCTTCAGAAGACACTGCAAAGAGATCCAGTGATAGTGTCTCTGATTCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACAGAAACATGGAGCTGGAGATGGTGATAAATTGTGTTTTAAATTTTTGTCTACTGGTTCTTGTCCAAGGGGAGAAAGGTGTAATTTTCGACATGATTTAGATGCAAAGGAGCAGTATATTAGAGGTGTTTGTTTTGATTTTTTGAACAAAGGGAAATGTGAAAGGGGTCCAGATTGCAACTTTAAGCACAGCTTGCAGGATGAAGGGGAAAATGATGCTGACAGGAGCCCAAGATCTCAAAATTTTAGCTCTAACAGATCAAAAGTGTGCTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTGATCGCTAGCATTGGAGAAAATTACTATTGTGCATTGGCTAAAGGCCCACTTGTTGAAGATCATGTTCTGCTTATACCAGTTGAGCATTTGCCAAGTACATTATCACTGTCAACGGAATCTGAAGTTGAGCTTAGTAAATTCCAGAACAGTCTAAGGATGTACCACAAGAATCAAGGAAAGCAAGTAATCTTCTTTGAGTGGGTCTCCAAACGTACTAGTCATGCCAATCTTCAGGTTGTTCCTATTCCAACTTCCAAAGCAACACTGGTTGAAAAAATATTCAATTTAGCTGCAGAAAAGCTGGGATTTAAATTTGTGTCTAAGAAATTTGATAGCGATTCTGATGGAAGAAAATTTTTGAGGGAACAATTTGATGGGAATTCAAGTTTGTTCTATGTTGAACTACCAGGAAGTGCAATATTGTTGCATCAGGTTGAAGATAATGAGAAATTTCCTGCCCAATTTGGTCGTGAGGTTGTATCAGGCTTGCTTAATATGGCGGATAAGGCAGATTGGAGGAATTGCAAATATAGCAAGGAGGAAGAAACAAAAATGGTTCAAGATTTTAAGAGTCGATTTCAAGAATTTGATCCAAACTGCTGA 1797 0.4174 MAPRILLCGDVMGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPESPDQLDEFMDYIEGRTQVPLPTYFIGDYGVGAPKVLLAASKDPANRGFKMDGLRICDNLYWLKGSGKFTLLGLSVAYLSGRQSPDAQQYGVYSQDDVDALRAIAEEPGIVDFGVTNRANASDIPAGLSDSMGSDSIIAELVGEIKPRYHIAGSKGIYYAREPYSNIEAVHVTRFIGLATVGNKDKQKFIHAISPTPASSMSSTDIAMKTTNTTLSPYTFVEKRTSSEDTAKRSSDSVSDSQYWRYDVSQKRQKHGAGDGDKLCFKFLSTGSCPRGERCNFRHDLDAKEQYIRGVCFDFLNKGKCERGPDCNFKHSLQDEGENDADRSPRSQNFSSNRSKVCWFCLSSPNVESHLIASIGENYYCALAKGPLVEDHVLLIPVEHLPSTLSLSTESEVELSKFQNSLRMYHKNQGKQVIFFEWVSKRTSHANLQVVPIPTSKATLVEKIFNLAAEKLGFKFVSKKFDSDSDGRKFLREQFDGNSSLFYVELPGSAILLHQVEDNEKFPAQFGREVVSGLLNMADKADWRNCKYSKEEETKMVQDFKSRFQEFDPNC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1305 598 SUPERFAMILY CCCH zinc finger 305 330 IPR036855 GO:0046872
Acco13g1305 598 Gene3D - 379 500 IPR036265 -
Acco13g1305 598 Pfam Protein similar to CwfJ C-terminus 1 379 492 IPR006768 -
Acco13g1305 598 SMART c3hfinal6 303 328 IPR000571 GO:0046872
Acco13g1305 598 SMART c3hfinal6 335 360 IPR000571 GO:0046872
Acco13g1305 598 ProSiteProfiles Zinc finger C3H1-type profile. 333 361 IPR000571 GO:0046872
Acco13g1305 598 FunFam Zinc finger CCCH domain-containing protein 59 361 487 - -
Acco13g1305 598 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 305 327 IPR000571 GO:0046872
Acco13g1305 598 CDD MPP_CWF19_N 6 224 - -
Acco13g1305 598 ProSiteProfiles Zinc finger C3H1-type profile. 301 329 IPR000571 GO:0046872
Acco13g1305 598 SUPERFAMILY HIT-like 385 457 IPR036265 -
Acco13g1305 598 Gene3D - 290 362 - -
Acco13g1305 598 Pfam Protein similar to CwfJ C-terminus 2 516 595 IPR006767 -
Acco13g1305 598 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 597 IPR040194 -
Acco13g1305 598 SUPERFAMILY CCCH zinc finger 336 362 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco13g1305 CwfJ_C_1 2.1e-37 CL0265