Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1289 ATGACCAACCACAACTATAACCCCGTCATCATGATTGGCTTTCTCTTCATCAGCGTCCTCGCTGCCTCCGCCTCCGGCAACTTCAACCAGGACTTCCAAATCACCTGGGGCGACGGCCGTGGCAAGGTCCTCGACGGCGGTCGCCTCCTCACCCTCTCCCTCGACAAGAGCTCCGGCTCCGGCTTCCGCTCTGTCAATGAATACCTCTTTGCAAAGATCGACATGCAGCTCAAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCACCACTTACTATCTAAGTTCAGAGGGGTCTAGTCATGATGAAATAGACTTTGAATTTCTGGGGAATTTGAGTGGTGATCCATATACTCTTCATACCAACATATACGCACAGGGAAAAGGTAACAGAGAGCAGCAATTTCACTTGTGGTTTGATCCCACTAAGGACTTTCACACTTATTCTATTCTATGGAATCCTCAAACCATCATATTCTCAGTGGATGGGAGACCAATAAGGGAATACAAGAACTTGGAATCAAGAGGGATTCCATTTCCAAAGAGCCAAGCAATGAGAATATACGGAAGCCTCTGGGATGCTGAGGATTGGGCCACCAGAGGAGGACTTGTCAAGACTGATTGGACTCAAGCTCCCTTCACCGCCTCTTTCAGAGACTTCGCTGCCCAAACCACCGGCCGCGGCGGCGGCGACCAGTCGTGGCTGAAACAGTCGCTGGACGCGGCGGGGCAAGCCAGTATCAAGGAGGTTCAGCAGAAGTATATGATATATAATTATTGTACTGATACAAAACGATTCCCTCAGGGGGTCCCACCTGAATGCTCTCCCTGA 828 0.5121 MTNHNYNPVIMIGFLFISVLAASASGNFNQDFQITWGDGRGKVLDGGRLLTLSLDKSSGSGFRSVNEYLFAKIDMQLKLVPGNSAGTVTTYYLSSEGSSHDEIDFEFLGNLSGDPYTLHTNIYAQGKGNREQQFHLWFDPTKDFHTYSILWNPQTIIFSVDGRPIREYKNLESRGIPFPKSQAMRIYGSLWDAEDWATRGGLVKTDWTQAPFTASFRDFAAQTTGRGGGDQSWLKQSLDAAGQASIKEVQQKYMIYNYCTDTKRFPQGVPPECSP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1289 275 CDD GH16_XET 24 273 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco13g1289 275 ProSitePatterns Glycosyl hydrolases family 16 active sites. 102 112 IPR008263 GO:0004553|GO:0005975
Acco13g1289 275 Pfam Glycosyl hydrolases family 16 29 208 IPR000757 GO:0004553|GO:0005975
Acco13g1289 275 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 23 273 IPR044791 GO:0004553
Acco13g1289 275 PIRSF EndGlu_transf 2 275 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco13g1289 275 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 216 IPR000757 GO:0004553|GO:0005975
Acco13g1289 275 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 230 273 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Acco13g1289 275 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 274 IPR013320 -
Acco13g1289 275 FunFam Xyloglucan endotransglucosylase/hydrolase 15 275 - -
Acco13g1289 275 Gene3D - 14 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1289 Acco-ChrAcco13 11941005 11943229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1289 1 273 Glycoside Hydrolase AT4G25810 64.561 1.89e-136 385