Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1288 ATGGAGAAGAAAAGGCTGTGTCTTGGTAAATTTTATTGGCGGTTTCTATTCGTCTCCATTTGCCCTCGTATTGAATTTCCCGACATTCCCTTGTTTCGATCAATTCCGCGGAATCCCCATAGAATGCCTACCTTCCATATCTCCTACTCTCCCTCCATCTCTATCACTGTGTGTCTAGCTTTTGTGACTTATGAGAATGCTAACAGGAATAAACACAAAACGTTCAGTGACATAACATCTGTGATTGCAGTGGAATCTCCTTCTTCCTCTCAGAATATTCAGGCATCATCCCTACAAAAATCTGAAGGATTGTTCTTTTTCTTTGGAGGGATAGTAATGCTCATCATATTGCTGATTCTTATATTTGTGTTTCGGAGTCACATTAAACCAGCAAAACTAATGAAAATGATAGCTCTGAACAAACAGCAGCCTCCGAAGAAACAGCAACAAGTAGCAGCAGAGGCGGTGGAGATTATAGCTTCAACAACAACAAGAAGTAAGCTGCAAGGATCCATGGAACTCCTGAGTGGGAACCTTCAAACAATTATCTACTTTGATTACTGGACATTGAAGAAGGCAACCAAGAATTTTCATTCTGGTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCAAATGGAAGGCTAATTGCAGTTAAGAAACTCTCTATTAACAAATCCAAACAAGGGGAGAAAGAATTTCTAGCAGAGGTGAGAATGATCACCAGTATTCAACACAAAAATCTGGTTCACCTTATTGGATGCTGCGCAGAAGGGATTGAAAGGATACTTGTGTATGAATACATGAGGAACAAAAGTTTGGACCTCTACATATATGGAAACCGTGGTCAATTTCTAGATTGGAGAACTAGGTTCCAGATTATTCTTGGAATAGCACGTGGATTGCAATATTTACACGAGGATTCACACAACAGAATTGTTCATCGAGATATTAAAGCAAGCAACATTCTTCTTGACAAAAAGTTTCATCCAAGGATTGGAGACTTTGGACTGGCGAGATTCTTCCCTGAAGGTGAAGATTACCTCAGCACTCAGTTTGCGGGAACATTAGGTTATATGGCTCCTGAATATGCCCTTAGAGGGGAATTGTCAGAAAAGGCAGACATCTATAGTTTTGGAGTCCTTGTACTTGAAATTATTTGTGGCAGGAAAAATACGGATGTTACTTTACCATCAGACATGCAGTATCTTCCTGAATATGCCTGGAAGCTCTTTGATAAGTCAAGATTGATGGATCTTATAGACCCAAAATTGCAGGAACTTGGATTTACAGAAAAGGATGTTATGCAAGCAATCCATGTGGCATTCTTAAGTATTCAGTCTCCAGCAAACTTAAGGCCTCCAATGTCAGAGATTGTAGCATTGTTGACATTCAAAATCGACATGGTTAGAACACCGATGAGACCATCCTTCTTCAGCCGAAGGCAGAAAAGTGATGATGAGGACCTTTCTTGGGAAGCGGTGTCTGAGGCATATCCTTCACCATTGCGCAGTGATTCTGCATCCATACCAAAGTAA 1554 0.4067 MEKKRLCLGKFYWRFLFVSICPRIEFPDIPLFRSIPRNPHRMPTFHISYSPSISITVCLAFVTYENANRNKHKTFSDITSVIAVESPSSSQNIQASSLQKSEGLFFFFGGIVMLIILLILIFVFRSHIKPAKLMKMIALNKQQPPKKQQQVAAEAVEIIASTTTRSKLQGSMELLSGNLQTIIYFDYWTLKKATKNFHSGNLLGSGGFGPVYRGKLANGRLIAVKKLSINKSKQGEKEFLAEVRMITSIQHKNLVHLIGCCAEGIERILVYEYMRNKSLDLYIYGNRGQFLDWRTRFQIILGIARGLQYLHEDSHNRIVHRDIKASNILLDKKFHPRIGDFGLARFFPEGEDYLSTQFAGTLGYMAPEYALRGELSEKADIYSFGVLVLEIICGRKNTDVTLPSDMQYLPEYAWKLFDKSRLMDLIDPKLQELGFTEKDVMQAIHVAFLSIQSPANLRPPMSEIVALLTFKIDMVRTPMRPSFFSRRQKSDDEDLSWEAVSEAYPSPLRSDSASIPK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1288 517 Gene3D Transferase(Phosphotransferase) domain 1 274 477 - -
Acco13g1288 517 SUPERFAMILY Protein kinase-like (PK-like) 178 471 IPR011009 -
Acco13g1288 517 Pfam Protein kinase domain 197 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1288 517 ProSiteProfiles Protein kinase domain profile. 197 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1288 517 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 494 - -
Acco13g1288 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Acco13g1288 517 FunFam Cysteine-rich receptor-like protein kinase 10 161 273 - -
Acco13g1288 517 CDD STKc_IRAK 203 469 - -
Acco13g1288 517 FunFam Cysteine-rich receptor-like protein kinase 2 274 475 - -
Acco13g1288 517 Gene3D Phosphorylase Kinase; domain 1 155 273 - -
Acco13g1288 517 SMART serkin_6 197 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1288 Acco-ChrAcco13 11924307 11928651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1288 142 485 Receptor kinase-like Gene Family AT1G56120 44.290 1.14e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco13g1288 Pkinase 3e-47 CL0016