Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1259 ATGGAGAATCTCCCCGACGAATTCAAGCATTACTGGGAGACGCACATGTTTTACCAAACTGAAGAGCTCGACAGCTGGGGATTGGACGAGGCAATCTCCGGCTACTATGATTCGAGCTCGCCCGACGGCAACGCTTTTTCCTCGACGGCTTCCAAGAACATCGTCTCGGAGAGGAATCGCCGGAAGAAGCTCAACGAACGCCTCTTCGCTCTCAGAGCAGTGGTTCCCAATATTAGCAAGATGGATAAGGCATCGATATTAAAGGATGCGATTGATTACATTCAAAACTTGCACGAACAAGAGAAGAGCATCGAAGCAGAGATAATGGAGCTTGAATCTGGCAAGAACATGAACATGAACATGAACATGATGATGATGAGCAACGGTGGTGAGAATCAGAATCAGATTTCGAGTTTTGGATATGAACATCAAGACCTGCCTGTGCTTCTCAGGTCAAAGAGGAACAAGACCCAGCAGCAGCTTTTTGAGTCCGTCAGCTCCAGAAATTCCCCCATTGAAGTTCATGGGCTAAGAGTGACATACCTGGGTGAGAAGACAGTGGTGGTGAGCCTAACGTGCAGCAAGAGGACAGACACAATGGTAAAGCTGTGTGAAGCGTTTGAATCATTGAAGCTAAAGATTATTACAGCCAGCATCACTTGCTTCTCTGGCACCCTCCTCAAGACCCTCTTCATTCAGGCGGATGAAGAAGAGAAGGATGTTGTTCAGATAAAGATCCAAGCAGCCATTGCAGCTCTCAATGATCCTGAAAGCCCAATGAGCATATAA 789 0.4702 MENLPDEFKHYWETHMFYQTEELDSWGLDEAISGYYDSSSPDGNAFSSTASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASILKDAIDYIQNLHEQEKSIEAEIMELESGKNMNMNMNMMMMSNGGENQNQISSFGYEHQDLPVLLRSKRNKTQQQLFESVSSRNSPIEVHGLRVTYLGEKTVVVSLTCSKRTDTMVKLCEAFESLKLKIITASITCFSGTLLKTLFIQADEEEKDVVQIKIQAAIAALNDPESPMSI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1259 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Acco13g1259 262 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 44 115 - -
Acco13g1259 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 113 IPR036638 GO:0046983
Acco13g1259 262 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 44 248 - -
Acco13g1259 262 Coils Coil 94 114 - -
Acco13g1259 262 Pfam Helix-loop-helix DNA-binding domain 55 97 IPR011598 GO:0046983
Acco13g1259 262 Gene3D - 47 114 IPR036638 GO:0046983
Acco13g1259 262 SMART finulus 54 103 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1259 Acco-ChrAcco13 11214564 11221308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1259 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 56.118 5.21e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco13g1259 HLH 3.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1259 13 11214564 11221308 Acco13g1259 13 11214564 11221308 ECH