Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1241 ATGGCTGCCGGTGGAAAGGAGAATGTAGTGAAGAAGTTGCAGAAAAGCTACTTCGATGTTCTCGGACTATGCTGTTCTTCAGAGGTACCTCTCATCGAGAACATTCTAAAAGCTCTCGACGGAATCAAGGAGTTCTCCGTCATCGTGCCGTCCAGAACCGTCATCGTCGTCCACGACAGTCTCGTAATCTCACAAGCTCAAATCGTGAAGGCACTGAATCAGGCAAGATTTGAAGCAAATATCAGATCAATGAATGGGACAGAGAAGGTGCAAAGGAGAATGCCAAGTCCATATGCAATTGCATGTGGAGTATTGCTTTTGCTTTCCTTTCTCAAGTATGCGTATCGTCCTTTGCAATATCTGGCCCTTGCTGCAGTAGCTGCTGGTGCTTACCCCATTATTTTGAAAGCCTTAGCCTCCATTCGCAACCTTAGGGTTGACATCAATATTCTCATGCTCACTGCAGTTATTGGGACAATTGCTATGAACGATTATATGGAAGCTGGCACCATAGTGTTTTTATCTTCAATCGCAGAGTGGCTAGAATCAAGCGCAAGCCACAGGGCGACCGCAGCGATGTCGTCGCTGACGAACATAGCCCCTCAAAAAGCAGTGATAGCAGAAACCGGAGAAGCGGTCGACACTGATGAGGTGAAAGTGAATACCATTATAGCTGTTAAAGCAGGCGAAGTGATACCCATTGATGGGGTTGTTGTAGAAGGCAGCTGCGAAGTTGATGAGAAGACATTGACTGGGGAGTCATACCCTGTACTCAAACAGAAAGACTCTTATGTGTGGACTGGTACAATCAACTTAAATGGTTACATTGCTGTGAAGACTACTGCACTTTCGGAGGATTGTGTGGTGGCCAAAATGGCGAAGCTTGTAGAAGAAGCTCAAAACAGCAAAACCAGCACCCAGAGATTGATTGATAAATTTGCCAAATTTTACACCCCAGCTGTTGTGGCCATATCAGCTCTTATAGCGGTCATTCCACTTGTGTTAAGAGTAAATAATGAGAGACATTGGTTTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTATCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCTGGTCTTCTCATCAAAGGGGGTGATTCTCTTGAAACCCTAGCAAAAATTAAGGTGATGGCTTTTGACAAAACGGGTACTATCACAAAGGGGGAATTTTTGGTGTCAAATTTCCAGTCTCTTTGTGATGACATCGATCTGAACACATTACTACAATGGGTCACAAGCATTGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCAATTGTGGACTATGGAAGGTCACTCTCCATTGAACCAAAGCCCGAAAAGGTGGCTGAATTTGAAAATTTCCCTGGAGAGGGTGTTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAATTGTCACTAGGGTTGGGTCTGAAACAGTTCCTGCCTCACAAGGTGACATTCTGGTTGGCAAAACTACTGGCTACATCTACTCTGGAGCAACGCCTATTGGATTTCTCTCTCTGACCGATGCTTGCCGATCTGGCGCCCGGGAGGCAATAAAAAAGCTGAAGTCATTGAGCATCAAAACCTCAATGCTCACAGGGGATAGTCAAGCAGCTGCCATGCAAGCACATGACCAGCTAGAGCATGTTCTAGAGATAGTCCATGCAGAACTTTTACCTGAAGACAAAGCAAAAATCATCAAAGAATTCAAGAAGGAAGGACCGACAGCTATGGTTGGAGATGGCATAAACGACGCACCTGCACTGGCTTTAGCGGATATTGGCATCTCAATGGGGATCTCAGGTTCTGCACTAGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGATCTCAGGAAGATACCTCAAGCCATCAAGCTTGCTAGAAGATCTCACAGGAAAGTAATAGAAAATATTATCTTGTCAGTAATTACTAAAGCTGCGATTCTTGGCTTGGCCATATGGGGTCATCCACTTGTCTGGGCGGCAGTTCTTGCTGATGTAGGAACATGCGTGTTGGTGATCTTAAACAGCATGCTACTTTTGAATGGCTGGTCCAAGCATAAAAGAAAATGTTGGAGACCTTCCTCTGGACCACACATCCATAAACATGGATGCAAGGCACCTAATGACAAGTTCCCTCATCATTATCATCATCATGAACATAAACATGAGCATCAGAACGATCATCATTGTTGCTCAGACAAGAAGAAAGTGATGTCTCAACCTCATAAATGCGCCTCCCTGGTTACTGTCTCCAAGTGCCAGTCTAGCCCTGCAATTTCAGGCTTGTGTGGACATGCTGTGCATGGTAATATCATGGATAGTCATGCTCAATGTAAAGTCAATGATGAGTTCCATGAACACAAGCATTGCCATCAAGGAAGCTGTGACAAGAATCAAGATGGAGTCCATTTGCATGATGCGAAAAATCTAAGTTCTTTGGGTTCTCACAATTTGGATCTGCCTGCAGAAGAGAAGCACACAACTGCATTAAACAGCATTGGTAATTGTTTGGAATACAGCATGTCCCATGAAACAGCAAACTGCCATAATGGAAACTGTGACATGGGAACTCATGGTAGACCATCGCCCATTTCTCCTTGCCATCTCAATTCTTCTGCTTCAAAAGATTGCCAGAAATTTGATAGTAAGCATTGCCACTTGATCTCTGGTTGTGAAAACACAAAATGTCATTCTACTGGGCATCAAGACGCAGAGTCTCATTCTGAACCTGCCAAAAAGCACCAGGAAGATCACGTATGTGTTGACATTGGCGATGAGTTTTTGAAAGAGAAAGAAACAGGGTGCTGTCACAGGGGCTCTACGGAAGAATGTGAGACATTCACAGTTGTGTGCACTTGTGAGAGTTCAAAAGACGGACAAGTTGGTGCATGTCGCATAGGCGAGAATAACTCTTCAAAGAAATCCACAGATTTCACAGTTGTGCATGCTTGTGTGAGTCTATACAAGGGAGAGAGTGGTTCATGTTGCAAGAGCCACAACATGAAGGAATGCTGTGGCAAGTCTGAACATTTACATGCTGGTTTTGTAGGAGGCTTATCAGATATTATCATTGAATAG 3141 0.4387 MAAGGKENVVKKLQKSYFDVLGLCCSSEVPLIENILKALDGIKEFSVIVPSRTVIVVHDSLVISQAQIVKALNQARFEANIRSMNGTEKVQRRMPSPYAIACGVLLLLSFLKYAYRPLQYLALAAVAAGAYPIILKALASIRNLRVDINILMLTAVIGTIAMNDYMEAGTIVFLSSIAEWLESSASHRATAAMSSLTNIAPQKAVIAETGEAVDTDEVKVNTIIAVKAGEVIPIDGVVVEGSCEVDEKTLTGESYPVLKQKDSYVWTGTINLNGYIAVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVAISALIAVIPLVLRVNNERHWFHFALVVLVSACPCALILSTPVATFCAYTKAAKSGLLIKGGDSLETLAKIKVMAFDKTGTITKGEFLVSNFQSLCDDIDLNTLLQWVTSIESKSSHPIAAAIVDYGRSLSIEPKPEKVAEFENFPGEGVHGKIDGRDIYIGNRKIVTRVGSETVPASQGDILVGKTTGYIYSGATPIGFLSLTDACRSGAREAIKKLKSLSIKTSMLTGDSQAAAMQAHDQLEHVLEIVHAELLPEDKAKIIKEFKKEGPTAMVGDGINDAPALALADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARRSHRKVIENIILSVITKAAILGLAIWGHPLVWAAVLADVGTCVLVILNSMLLLNGWSKHKRKCWRPSSGPHIHKHGCKAPNDKFPHHYHHHEHKHEHQNDHHCCSDKKKVMSQPHKCASLVTVSKCQSSPAISGLCGHAVHGNIMDSHAQCKVNDEFHEHKHCHQGSCDKNQDGVHLHDAKNLSSLGSHNLDLPAEEKHTTALNSIGNCLEYSMSHETANCHNGNCDMGTHGRPSPISPCHLNSSASKDCQKFDSKHCHLISGCENTKCHSTGHQDAESHSEPAKKHQEDHVCVDIGDEFLKEKETGCCHRGSTEECETFTVVCTCESSKDGQVGACRIGENNSSKKSTDFTVVHACVSLYKGESGSCCKSHNMKECCGKSEHLHAGFVGGLSDIIIE 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1241 1046 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Acco13g1241 1046 SFLD Haloacid Dehalogenase 380 649 - -
Acco13g1241 1046 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Acco13g1241 1046 PRINTS Copper-transporting ATPase signature 575 592 - -
Acco13g1241 1046 PRINTS Copper-transporting ATPase signature 188 206 - -
Acco13g1241 1046 PRINTS Copper-transporting ATPase signature 632 646 - -
Acco13g1241 1046 PRINTS Copper-transporting ATPase signature 319 333 - -
Acco13g1241 1046 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 521 532 - -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 597 616 - -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 246 260 - -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Acco13g1241 1046 PRINTS P-type cation-transporting ATPase superfamily signature 543 553 - -
Acco13g1241 1046 FunFam Copper-transporting ATPase 1, putative 186 300 - -
Acco13g1241 1046 Pfam haloacid dehalogenase-like hydrolase 393 611 - -
Acco13g1241 1046 SUPERFAMILY HAD-like 396 698 IPR036412 -
Acco13g1241 1046 SUPERFAMILY Calcium ATPase, transduction domain A 211 296 IPR008250 -
Acco13g1241 1046 Gene3D - 9 83 - -
Acco13g1241 1046 Gene3D - 186 300 - -
Acco13g1241 1046 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 10 702 - -
Acco13g1241 1046 FunFam Putative cadmium/zinc-transporting ATPase 3 408 529 - -
Acco13g1241 1046 SUPERFAMILY HMA, heavy metal-associated domain 11 85 IPR036163 GO:0046872
Acco13g1241 1046 Gene3D - 408 529 IPR023299 GO:0000166
Acco13g1241 1046 Gene3D - 388 648 IPR023214 -
Acco13g1241 1046 NCBIfam HAD-IC family P-type ATPase 171 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1241 1046 SFLD p-type atpase 380 649 IPR044492 -
Acco13g1241 1046 Pfam E1-E2 ATPase 207 376 - -
Acco13g1241 1046 NCBIfam cadmium family heavy metal-translocating P-type ATPase 148 701 - -
Acco13g1241 1046 NCBIfam heavy metal translocating P-type ATPase 148 700 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco13g1241 1046 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 490 IPR023298 -
Acco13g1241 1046 CDD P-type_ATPase_HM 99 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1241 Acco-ChrAcco13 10883244 10894378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1241 11 720 Primary Pumps ATPases AT4G30110 67.651 0.0 1004