Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1224 ATGGTTGGAATGCTTGCTGATCCAAGAGAGGCACGAGCTGGAATTATGGAAGTCCACTTCTTACCATTCAATCCCGTGGACAAGAGAACTGCTTTGACTTACGTTGATTCTGATGGAAAGTGGCACAGGGCAAGCAAAGGAGCTCCTGAGCAGATCATGGACTTGTGTAACCTCAAGGAAGATACAAAAAAGAGGGTCCACGCTATCATTGACAAGTTTGCAGAAAGAGGGCTTCGTTCGCTTGCTGTTGCCAGACAGGAAGTTCCTGAGAAAACTAAGGAAAGTCCTGGTGGTCCATGGCAGTTTGTTGGCTTGCTGCCATTGTTTGATCCCCCAAGGCATGACAGTGCTGAGACCATCCGAAGAGCTCTCAATCTTGGTGTAAATGTCAAAATGATTACTGGTGATCAACTTGCCATCGCTAAGGAGACTGGTAGGAGGCTTGGGATGGGAACAAATATGTTTCCATCTGCTACCTTGCTTGGTCAAGACAGAGGCTTAAATATGGCTGCACTCACTGTAGAGCAGTTGATTGAGAAGGCACATGGATTTGCTGGAGTATTTCCTGAGCACAAATATGAAATTGTGAAGAAGTTCCAAGAAAGGAAGCACATTTGTGGAATCACTGGTGATGATGTGAATGATGCACCTGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCCGACGCTACTGATGCTGCAAGAGGTGCTTCTGACATTGTCTTAACAGAACCTGGATTGAGTGTTATTATCAGTGCTGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAAAACTATACCATCTATGCAGTTTCTATCACCATCCGTATAGTGTTTGGCTTCATGTTTATTGCACTGATTTGGAGATTTGACTTCTCTCCATTCATGGTTTTGATTATTGCCATTCTTAATTATGGAACAAGCATGACTATTTCAAAGGACAGAGTGAAGCCATCTCCTATGCCTGATAGCTGGAAACTGGAAGAAATATTTGCTACCGTAGTTGCTCTGGGAGGCTACTTGGCATTGATGACTGTCATATTCTTCTGGGCAATTCATGAAACTACATTCTTCCCTGACAAATTTGGAGTCAGAGACATTCATGATGACAATCATCGAATGACATCAGCTTTGTATCTTCAAGTCAGTATAGTGAGCCAGGCTTTAATCTTTGTAACCCGTTCTCGCAGCTGGTCCTATGTTGAACGCCCTGGAGTTCTGTTACTAGTTGCATTTGCTATTGCTCAGCTGGCTTGGGTTTATATGTTAGTAAACAAGAATTTGGTTGAAGGAAATATGAAGAATGAGAATGGACATGGACATGGACATGGAGGGCGTATATGTGTGTCTGAGGCTAGACAGAAGAATGAAATTGGGGAAGTGGTGTTGACGCTGTTGGAGGAACAGGTTGCTGATGGAGGAACAGGTTGCTGA 1440 0.4347 MVGMLADPREARAGIMEVHFLPFNPVDKRTALTYVDSDGKWHRASKGAPEQIMDLCNLKEDTKKRVHAIIDKFAERGLRSLAVARQEVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMFPSATLLGQDRGLNMAALTVEQLIEKAHGFAGVFPEHKYEIVKKFQERKHICGITGDDVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWRFDFSPFMVLIIAILNYGTSMTISKDRVKPSPMPDSWKLEEIFATVVALGGYLALMTVIFFWAIHETTFFPDKFGVRDIHDDNHRMTSALYLQVSIVSQALIFVTRSRSWSYVERPGVLLLVAFAIAQLAWVYMLVNKNLVEGNMKNENGHGHGHGGRICVSEARQKNEIGEVVLTLLEEQVADGGTGC 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1224 479 FunFam Plasma membrane ATPase 102 257 - -
Acco13g1224 479 SUPERFAMILY Calcium ATPase, transmembrane domain M 258 426 IPR023298 -
Acco13g1224 479 Pfam haloacid dehalogenase-like hydrolase 101 223 - -
Acco13g1224 479 PRINTS H+-transporting ATPase (proton pump) signature 66 84 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 PRINTS H+-transporting ATPase (proton pump) signature 181 197 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 PRINTS H+-transporting ATPase (proton pump) signature 240 265 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 PRINTS H+-transporting ATPase (proton pump) signature 209 225 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 PRINTS H+-transporting ATPase (proton pump) signature 381 402 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 SUPERFAMILY HAD-like 33 256 IPR036412 -
Acco13g1224 479 Gene3D - 110 246 IPR023214 -
Acco13g1224 479 Gene3D - 247 429 - -
Acco13g1224 479 PRINTS P-type cation-transporting ATPase superfamily signature 232 244 - -
Acco13g1224 479 PRINTS P-type cation-transporting ATPase superfamily signature 104 115 - -
Acco13g1224 479 PRINTS P-type cation-transporting ATPase superfamily signature 209 228 - -
Acco13g1224 479 PRINTS P-type cation-transporting ATPase superfamily signature 126 136 - -
Acco13g1224 479 Gene3D - 2 109 IPR023299 GO:0000166
Acco13g1224 479 NCBIfam HAD-IC family P-type ATPase 178 298 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1224 479 FunFam Membrane H(+)-ATPase1 49 109 - -
Acco13g1224 479 PANTHER CALCIUM-TRANSPORTING ATPASE 2 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1224 Acco-ChrAcco13 10628912 10632383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1224 1 451 Primary Pumps ATPases AT2G18960 79.379 0.0 728