Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1223 ATGTGGGATGATGTCTTGCGGAATCCACTTTTTTCTAATACCCTCTGTTTACAGGAACGTATTCCCATTGATGAAGTGTTTGAGCAATTGAAATGCACCAAGGAAGGATTGTCCTCGACGGAAGGAGCCAATCGGCTTCAAATATTTGGACCCAACAAGCTAGAGGAGAAAAAGGAAAGCAAAATACTCCAGTTTCTTGGTTTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCAATTACCCTTGCAAATGGTGGTGAGAGGCCTCCAGATTGGCAAGACTTTGTGGGTATTATCGCCTTGTTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAACAACGCTGGAAATGCTGCTGCGGCTCTTATGGCTGGCTTTGCTCCAAAAACAACTCCAAAAACAAAGGTTCTCAGAGATGGTAAGTGGAGTGACGAAGAGGCTGCAATTCTTGTGCCAGGGGACATCATAAGCGTCAAGCTAGGTGATATCATTCCCGCTGATGCTCGTCTTCTCGAGGGTGATCCTTTGAAGGTAGATCAATCTGCTCTTACTTGGGAATCCCTCCCCGTGACCAAGAATCCCGGGGATGAAGTTTTCTCAGGATCAACTTGTAAGCAAGGTGAAATTGAGGCTGTTGTTATTGCAACTGGAGTCCACACATTCTTTGGGAAGGCAGCTCACCTTGTGGATAGCACCAATCAAGTTGGACACTTCCAGAAGGTTCTCACAGCAATTGGGAACTTTTGCATTTGTTCTATTGCAGTTGGTATGCTGGCTGAGGTCATAGTCATGTACCCAATTCAACATCGCGCATACAGGGATGGAATTGACAACCTTTTGGTCCTCTTGATTGGAGGAATCCCCATTGCTATGCCTGCTGTGTTGTCAGTCACAATGGCCATTGGTTCTCACGAGCTCTCACAGCAAGGTGCTATCACCAAGCGTATGACTGCCATTGCATAG 981 0.4618 MWDDVLRNPLFSNTLCLQERIPIDEVFEQLKCTKEGLSSTEGANRLQIFGPNKLEEKKESKILQFLGFMWNPLSWVMEAAAIMAITLANGGERPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGFAPKTTPKTKVLRDGKWSDEEAAILVPGDIISVKLGDIIPADARLLEGDPLKVDQSALTWESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEVIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPAVLSVTMAIGSHELSQQGAITKRMTAIA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1223 326 PANTHER CALCIUM-TRANSPORTING ATPASE 21 325 - -
Acco13g1223 326 Gene3D - 134 222 - -
Acco13g1223 326 Pfam Cation transporter/ATPase, N-terminus 21 83 IPR004014 -
Acco13g1223 326 Gene3D - 96 325 - -
Acco13g1223 326 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Acco13g1223 326 FunFam Plasma membrane ATPase 138 222 - -
Acco13g1223 326 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Acco13g1223 326 Pfam E1-E2 ATPase 137 314 - -
Acco13g1223 326 NCBIfam HAD-IC family P-type ATPase 103 312 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco13g1223 326 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 325 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1223 Acco-ChrAcco13 10627552 10628737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1223 19 325 Primary Pumps ATPases AT2G07560 85.342 1.11e-178 517