Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1218 ATGATTACTGTGATTTATATGAAATTAACAAGCAAATGTTACCCTCGTATCTCCCAGCTTATTGCAGACTCAGAATTTCTGACATACACAATGGATAAGTTTCTAAATGAAATGGCAAGGGAAAAGCCAATAAGGTTCACATTACATACTCTAATGCTTGCAACTAACAATTACTCCAACATGTTGGGTTCAGGTGGTTTTGGATCAGTCTATAAAAGGACTTTTAGTGATGGAACCATTGTGGCTGTGAAGGTTTTGAATGGGAGCTCTGACAAAATAGAGGAGCAATTCATGGCTGAAGTAGGCACAATTGGAAGAGTTCATCATTTCAATCTACTTCGCCTCTTTGGATTTTGCATTGAGGGGAATATTAGGGCACTAGTTTATGAGTACATGGGCAACGGCTCGCTTGACAAGTATCTATTTAATAAAAACAAGGCATTAGGATTTAAAAAGCTTCAAGAGATTGCGGTGGGAACTGCCAAAGGAATTTCGTATTTGCATGAAGAGTGCCAACAAAGAATTGTCCATTATGACATAAAACCAGAAAATATCCTCTTGGACAACGACTTCTATCCTAAAGTTGCTGACTTTGGTTTAGCCAAGCTTTGTAATAGGGAAAATACTCATATTACCATGACCGGAGGCAGAGGAACTCCTGGTTATGCTGCGCCGGAGCTTTGGATGCCATTTCCGGTAACCTACAAGTGTGATGTTTACAGTTTTGGAATGTTGTTATTTGAAATCATAGGTGGGAGAAGGAACCTTGATATTAATCTTGCAGAAGAAAGTAAAGAGTGGTTTCCAAGATGGGTTTGGGTAAAATTTGATAGTGGAGATTTAAATGAGATGATAACAGAATGCGGAATAGAGGAGAATGACAAGGAAATGGCAGAAAGAATGGTTAAGATAGCTCTTTGGTGTGTTCAGTATAAACCTGAAATGAGGCCTACGATGAGTGTTGAGGTGAAAATGTTGGAAGGTTCAGAGGAAATCCCACAACCTGTGAATCCTTTTCAGCACTTCATGGATTCAAGTTTTCCAGTAAAATCAGTTCAAACATCACAAATTGATACTAGTTTTACTTCTGGCTCTTCTATAACAACAGCTAAACCTAGCACTTTGAATGCTACTCCTATCATGAGTAAGTATGAGATCCAAATAGCTTCAAGCCAGGATTAA 1182 0.3849 MITVIYMKLTSKCYPRISQLIADSEFLTYTMDKFLNEMAREKPIRFTLHTLMLATNNYSNMLGSGGFGSVYKRTFSDGTIVAVKVLNGSSDKIEEQFMAEVGTIGRVHHFNLLRLFGFCIEGNIRALVYEYMGNGSLDKYLFNKNKALGFKKLQEIAVGTAKGISYLHEECQQRIVHYDIKPENILLDNDFYPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTYKCDVYSFGMLLFEIIGGRRNLDINLAEESKEWFPRWVWVKFDSGDLNEMITECGIEENDKEMAERMVKIALWCVQYKPEMRPTMSVEVKMLEGSEEIPQPVNPFQHFMDSSFPVKSVQTSQIDTSFTSGSSITTAKPSTLNATPIMSKYEIQIASSQD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1218 393 Gene3D Phosphorylase Kinase; domain 1 24 131 - -
Acco13g1218 393 Gene3D Transferase(Phosphotransferase) domain 1 132 337 - -
Acco13g1218 393 SUPERFAMILY Protein kinase-like (PK-like) 37 326 IPR011009 -
Acco13g1218 393 PANTHER OS07G0415500 PROTEIN 35 339 - -
Acco13g1218 393 ProSiteProfiles Protein kinase domain profile. 56 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1218 393 SMART serkin_6 56 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1218 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Acco13g1218 393 FunFam serine/threonine-protein kinase PBS1-like 28 131 - -
Acco13g1218 393 FunFam Putative receptor-like protein kinase 132 334 - -
Acco13g1218 393 Pfam Protein tyrosine and serine/threonine kinase 59 321 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1218 Acco-ChrAcco13 10515680 10516861 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1218 45 336 Receptor kinase-like Gene Family AT1G66980 44.371 3.76e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Acco13g1218 PK_Tyr_Ser-Thr 9.5e-46 CL0016