Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1216 ATGTTTTCTAGTTTTTGTGGTTGTTGGAACTTTGACACTAATTCATTTTATTCCTATATTGTAGGTGTGCTTCCGGTCTTCATACTGATAACCATATATGTCTTTTATTGCAAAATATGTATGTTCAAAAGGCGCAAACCGGCAAAAGTGATAGAACTGGAAAGTGGGACGAACTCAGAGTTTCTAACATATAGAATGGATAAGTTTCTCAATGATATTGAATCAGAAAAGCCAATCAGATTCACTTCACATCAACTAATGCGTGCAACAACCAACTACTCCAACACGTTGGGTTCAGGAGGTTTTGGATCAGTTTATGAAGGAACTTTTGTTGATAGATCAGTTGTTGCAGTCAAAGTTCTACGTGGTGGCATTTCTGACAAGAGAATGGAGGAGCAATTCATGGCTGAAGTCGGCACAATTGGACGAGTTCATCATTTCAATCTGGTTCGCCTCATTGGATTTTGCGTCGAAAAGGACATGGCGGCTCTAGTTTATGAGTACATGAGCAATGGCTCTCTCGACAAATATCTGTTTGGTGAAAATAAAAAGAACTTAGCATTTGAGAAGCTGCATGAGATTGCGGTTGGAACAGCCAAAGGAATTGCTTACCTGCATGAAGAATGCCAAGAGAGGATCATTCACTATGACATAAAACCAGAGAACATCCTTTTGGACGATGATTTGCATCCTAAAGTTTCTGATTTTGGTTTGGCCAAGCTTTGTAACAGGGAAAAGTCTTATATCACTATGACAGGTCTAAGAGGGACACCAGGTTATGCTGCGCCAGAACTTTGGATGCCTTTTCGTGTGACTCACAAGTGCGATGTTTTCAGCTTTGGCATGTTGTTATTTGAAATCATAGGAAGAAGAAGGAACCTTGATGCAGACCTATCAGAAAGTCAAGAATGGTTTCCAAGATTGGTTTGGATCAAGTTTGAGAGTGAAAACCTAGAAGACTTGATAAACAATTGTAGTATTAAAGATAAAGACAAGGATATGGTAAAAAGGATGGCGATGATAGCTTTTTTTTGTGTTCAGTATAGGCCAGAACTGAGACCCATAATGAGTGTTGTGGTGAAAATGTTGGAAGGCTCGATGGATATCCCAAATCCTACAAATCCTTTTCAACACTTGATGGAAGAAGATCTTCCAACAATCAAAGCAGCACAAAATGAAGTTAGCGTCAATGTTGTCTCGTCTCTTAAGGTAACCGAATCTTCCGTTGTCTCATCATCTCCTGAGATCGATATGGATTCTATCCAAAATTAA 1272 0.3915 MFSSFCGCWNFDTNSFYSYIVGVLPVFILITIYVFYCKICMFKRRKPAKVIELESGTNSEFLTYRMDKFLNDIESEKPIRFTSHQLMRATTNYSNTLGSGGFGSVYEGTFVDRSVVAVKVLRGGISDKRMEEQFMAEVGTIGRVHHFNLVRLIGFCVEKDMAALVYEYMSNGSLDKYLFGENKKNLAFEKLHEIAVGTAKGIAYLHEECQERIIHYDIKPENILLDDDLHPKVSDFGLAKLCNREKSYITMTGLRGTPGYAAPELWMPFRVTHKCDVFSFGMLLFEIIGRRRNLDADLSESQEWFPRLVWIKFESENLEDLINNCSIKDKDKDMVKRMAMIAFFCVQYRPELRPIMSVVVKMLEGSMDIPNPTNPFQHLMEEDLPTIKAAQNEVSVNVVSSLKVTESSVVSSSPEIDMDSIQN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1216 423 SUPERFAMILY Protein kinase-like (PK-like) 73 364 IPR011009 -
Acco13g1216 423 Pfam Protein tyrosine and serine/threonine kinase 94 363 IPR001245 GO:0004672|GO:0006468
Acco13g1216 423 Gene3D Transferase(Phosphotransferase) domain 1 169 374 - -
Acco13g1216 423 ProSiteProfiles Protein kinase domain profile. 91 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1216 423 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Acco13g1216 423 Gene3D Phosphorylase Kinase; domain 1 65 168 - -
Acco13g1216 423 SMART serkin_6 91 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1216 423 FunFam serine/threonine-protein kinase PBS1-like 63 168 - -
Acco13g1216 423 PANTHER OS07G0415500 PROTEIN 19 376 - -
Acco13g1216 423 FunFam Putative receptor-like protein kinase 169 371 - -
Acco13g1216 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1216 Acco-ChrAcco13 10501864 10503135 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1216 80 385 Receptor kinase-like Gene Family AT5G38280 40.895 2.24e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Acco13g1216 PK_Tyr_Ser-Thr 1.8e-48 CL0016