Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1214 ATGTCTTCTGGATCTCAAAGTCTGCTCATTGCCTTGCTTACAAGTGTGCTTCCGGTCTTCATACTGATAACCGTGTATGTCTTTTATTGCAAAATATGTATGTTCAAGAGGCGCAAACCAGCAAAAGTGAGAGAAGCGGAAAGTGGAACGAACTCAGAGTTTCTAACATATAGAATGGATAAGTTTCTCAATGATATTGAATCAGAAAAGCCAATCAGATTCACTTCACATCAACTAATGCGTGCAACAAACAACTACTCTAACACGTTGGGTTCAGGAGGTTTTGGATCAGTTTATAAAGGAGCTTTTGTTGATGGATCTGTTGTTGCAGTCAAAGTTCTACGTGGTGGCATTTCTGACAAGAGAATGGAGGAGCAATTCATGGCTGAAGTCGGCACAATTGGACGAGTTCATCATTTCAATCTGGTTCGCCTCATTGGATTTTGCGTCGAAAAGGACACGGCGGCTCTAGTTTATGAGTACATGAATGGCTCTCTCGACAAATATCTGTTTGGTGAAAATAAGAGCTTAGCATTTGAGAAGCTGCATGAGATTGCGGTTGGAACAGCCAAAGGAATTGCCTACCTGCATGAAGAATGCCAAGAGAGGATCATTCACTATGACATAAAACCAGAGAACATCCTTTTGGACGATGATTTGCATCCTAAAGTTTCTGATTTTGGTTTGGCCAAGCTTTGTAACAGGGAAAAGTCTTATATCACTATGACAGGTCTAAGAGGGACACCAGGTTATGCGGCGCCAGAACTTTGGATGCCTTTTCGTGTAACTCACAAGTGCGATGTTTTCAGCTTTGGGATGCTGTTATTTGAAATCATAGGAAGAAGAAGAAACTTTGATGCAAACCTGTCAGAAAGTCAAGAATGGTTTCCAAGATTGGTTTGGATCAAGTTTGAGAGTGAAAACCTTGAAGAGTTTATAAACGATTGTGGTATTAAAGATAAAGACAAGGATATGGTGAAAAGAATGGCGATGATAGCTTTTTTGTGTGTTCAGTATAGACCAGAACTGAGACCCATAATGAGTGTTGTGGTGAAAATGTTGGAAGGCTCGATGGATATCCCAAATCCTACAAATCCATTTCAAAACTTGATGGAAGAAGATCTTCCAAAAATCGAAGTAGCACAAAAGGAAGTTAGTATCAACGTTGTCTCGTCTCTTCAGGTAACCGAATCTTCCATTGTCTCGTCATCTGCTGAGATCGATATGGATTCTATCCAAAATTAA 1245 0.4016 MSSGSQSLLIALLTSVLPVFILITVYVFYCKICMFKRRKPAKVREAESGTNSEFLTYRMDKFLNDIESEKPIRFTSHQLMRATNNYSNTLGSGGFGSVYKGAFVDGSVVAVKVLRGGISDKRMEEQFMAEVGTIGRVHHFNLVRLIGFCVEKDTAALVYEYMNGSLDKYLFGENKSLAFEKLHEIAVGTAKGIAYLHEECQERIIHYDIKPENILLDDDLHPKVSDFGLAKLCNREKSYITMTGLRGTPGYAAPELWMPFRVTHKCDVFSFGMLLFEIIGRRRNFDANLSESQEWFPRLVWIKFESENLEEFINDCGIKDKDKDMVKRMAMIAFLCVQYRPELRPIMSVVVKMLEGSMDIPNPTNPFQNLMEEDLPKIEVAQKEVSINVVSSLQVTESSIVSSSAEIDMDSIQN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1214 414 SUPERFAMILY Protein kinase-like (PK-like) 66 355 IPR011009 -
Acco13g1214 414 Pfam Protein kinase domain 88 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1214 414 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Acco13g1214 414 Gene3D Phosphorylase Kinase; domain 1 58 161 - -
Acco13g1214 414 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Acco13g1214 414 PANTHER OS07G0415500 PROTEIN 6 367 - -
Acco13g1214 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Acco13g1214 414 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1214 414 SMART serkin_6 84 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1214 414 FunFam PR5-like receptor kinase 161 362 - -
Acco13g1214 414 FunFam serine/threonine-protein kinase PBS1-like 56 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1214 Acco-ChrAcco13 10457412 10459565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1214 73 376 Receptor kinase-like Gene Family AT5G38280 41.853 9.29e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Acco13g1214 Pkinase 1.3e-46 CL0016