Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1213 ATGTCTAACATCGATACCTCGCCGGAGGACTGCCTATCCGCCATTGTGTCCTTCACTTCTCCGGCGGACGTTACCTTATTGTGCGTCGTGGAAGTTGGCATAACAGTATTTGCCATATTCCATTATCGTAAAAGATTTCATGAGAACAAAAGGCGTCACAAAGAGTTTCTGACATTGACTATGGAAAAGTTTCTGAATGATTTGGAAAGAGAGAGCCCAACCATGTTCACCTCAGACAACCTAGTACGTGCAACAAACAATTACTCCAACATGTTGGGGTCAGGAGGTTTTGGATCAGTCTATAAAGGAACTTTCAGTGATGGAACTGTTGTTGCAGTCAAAGTTCTACATGGCACTTTTGACGAGAGAATGGAACAGCAATTCATGGCTGAAGTCGGCACGATTGGAAAAGTCCGTCACTTAAATCTGGTTCGCCTCATCGGATTTTGCATTGAAAAGAATACGACAGCTCTAGTTTACGAGTACATGAGCAATGGCTCTCTTGACAAATATCTGTTTAGTGAAAACAAGGAGTTAGCACTTGAGATGCTACAGAAGATTGCAATTGCTGATTTTGGTTTAGCCATGCTTTGTAACAGGGAAAAGTCTGATGTCACTATGACAGGTCAAAGAGGGACACCAGATAATGATAAAGAGAAAGTGAAAAGAGTGATAAGGATAGCCCTGTGGTGTATTCAGTATAGAAGAGATTTGAGACCTAAAATGAGTGATGTGGTGAAAATGTTGGAAGGCTCCATGGATGTTCTAGAACCTCCAAACCCATTTCAACATTTGTTGCTTGAAAATAATGGAATTGAGGCATCACAAATGGATAGTAGTAGTGATGATGATGATGATGGCTCATCTATATGCTCTTGA 879 0.4118 MSNIDTSPEDCLSAIVSFTSPADVTLLCVVEVGITVFAIFHYRKRFHENKRRHKEFLTLTMEKFLNDLERESPTMFTSDNLVRATNNYSNMLGSGGFGSVYKGTFSDGTVVAVKVLHGTFDERMEQQFMAEVGTIGKVRHLNLVRLIGFCIEKNTTALVYEYMSNGSLDKYLFSENKELALEMLQKIAIADFGLAMLCNREKSDVTMTGQRGTPDNDKEKVKRVIRIALWCIQYRRDLRPKMSDVVKMLEGSMDVLEPPNPFQHLLLENNGIEASQMDSSSDDDDDGSSICS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1213 292 ProSiteProfiles Protein kinase domain profile. 86 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco13g1213 292 SUPERFAMILY Protein kinase-like (PK-like) 74 267 IPR011009 -
Acco13g1213 292 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Acco13g1213 292 PANTHER OS07G0415500 PROTEIN 217 262 - -
Acco13g1213 292 FunFam serine/threonine-protein kinase PBS1-like 48 162 - -
Acco13g1213 292 Pfam Protein tyrosine and serine/threonine kinase 89 188 IPR001245 GO:0004672|GO:0006468
Acco13g1213 292 Gene3D Phosphorylase Kinase; domain 1 59 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1213 Acco-ChrAcco13 10415963 10418008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1213 15 198 Receptor kinase-like Gene Family AT2G43700 36.364 3.63e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Acco13g1213 PK_Tyr_Ser-Thr 1.8e-20 CL0016