LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco13g1210	ATGAGTTTTGTGTTTTCTCCACCGTCGTTTCATAGTTCTTCATACGATGATTTTCAGACACAAGCCCAAGATACGTTCAATAAATTCGGTGACAACGTTAATTCTACGATGAAATGGGCAGTGGCTGAGTCTATTGTTTATGGGGTGGTGGTGATAATAGCCATTATAGCAATAGTATACGCCATTATTGAGTGCCTGAAGAAAGCCGGATCAGCGATTCCAGCTTACACCCAGATTCCAACCACAGAAAATAACCATAAAGCTTCAGATTCACATCCTTCAAACAACAAAGAAATTACATTAGCAATGCCACCAGATACACAAGAAGTTGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCAATTAGATTCTCACCTGAGGAACTTGAACAGATCACAAACAACTACACCACTGTTTTGGGTTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCAAATGGACAACAAGTTGCAGTGAAAGTTCTCAACAGCATGGATCTGGGCACAGAAGAACAATTCAAGGCAGAAGTTAGCACTATTGGAAGAACGTACCATATCAATTTAGTTATGCTTTATGGCTTCTGTTTCCACCGCGACAAGCGAGCTCTTGTATACGAGTTTGTCCACAAGGGATCTCTAAACAATTTATTATTTGGCAGTCTCAACAGAGAAGTTGAGTTTGAGAAGCTTCATGAGATTGCCATTGGAACAGCGAAAGGAATCGCTTACTTACACGAAGAGTGTCAATATAGGATCATTCACTACGATATAAAACCAGAGAATATACTTCTTGGCTTCAACTTAGAACCAAAAGTAGCAGACTTTGGTCTTGCAAAACTCTGCAGCAGAGAAAGCAGCCAAGTGCATATGTCACACTTTAGAGGAACAAGAGGGTATGCTGCTCCAGAATTGTGGAATCTTAATCATGTGAATCATAAGTGTGATGTTTATAGTTTTGGTATTGTTTTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGATAGTGGTTACAGTGAATCACAACAATGGCTTCCAAAATGGACTTGGGATATGTTTGAGAATAATGAATTAGCAGTGATGCTTTCTCTGTATGGGATTGAAGAGAAAGACAGGGAAAAAGCTAAGAGAATGTTAATGGTGGCTCTTTGGTGCGTTCAATATCTGGCATCTGATAGGCCTCTTATGAGTAATGTGGTGAAGATGTTAGAGGGTGATATGGAAATCCGTACACCACCATTTCCCTTTCAGAATTTGGCGTCTTTTAAACCACCTTTGACTTCACAGGGAACTAATAATGAAGATTCAGATGCTTCTTCACGGGTGACAGAATCTTCTGGACAATCTGGCTAA	1374	0.3996	MSFVFSPPSFHSSSYDDFQTQAQDTFNKFGDNVNSTMKWAVAESIVYGVVVIIAIIAIVYAIIECLKKAGSAIPAYTQIPTTENNHKASDSHPSNNKEITLAMPPDTQEVEFATMERFLNNINQEKPIRFSPEELEQITNNYTTVLGSGAFGVVYEGELSNGQQVAVKVLNSMDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVHKGSLNNLLFGSLNREVEFEKLHEIAIGTAKGIAYLHEECQYRIIHYDIKPENILLGFNLEPKVADFGLAKLCSRESSQVHMSHFRGTRGYAAPELWNLNHVNHKCDVYSFGIVLFEIVGRRRHFDSGYSESQQWLPKWTWDMFENNELAVMLSLYGIEEKDREKAKRMLMVALWCVQYLASDRPLMSNVVKMLEGDMEIRTPPFPFQNLASFKPPLTSQGTNNEDSDASSRVTESSGQSG	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco13g1210	457	MobiDBLite	consensus disorder prediction	431	457	-	-
	Acco13g1210	457	SUPERFAMILY	Protein kinase-like (PK-like)	122	411	IPR011009	-
	Acco13g1210	457	ProSitePatterns	Protein kinases ATP-binding region signature.	146	168	IPR017441	GO:0005524
	Acco13g1210	457	SMART	serkin_6	140	410	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g1210	457	FunFam	S-receptor-like serine/threonine-protein kinase	109	215	-	-
	Acco13g1210	457	Gene3D	Transferase(Phosphotransferase) domain 1	216	418	-	-
	Acco13g1210	457	Gene3D	Phosphorylase Kinase; domain 1	106	215	-	-
	Acco13g1210	457	FunFam	Putative receptor-like protein kinase	216	418	-	-
	Acco13g1210	457	ProSiteProfiles	Protein kinase domain profile.	140	396	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g1210	457	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	260	272	IPR008271	GO:0004672\|GO:0006468
	Acco13g1210	457	Pfam	Protein kinase domain	144	406	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco13g1210	457	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	33	421	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco13g1210	Acco-ChrAcco13	10362824	10365089	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco13g1210	129	447	Receptor kinase-like Gene Family	AT5G38280	42.331	4.87e-85	273

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-Os	Acco13g1210		Pkinase	2.6e-44	CL0016