Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1206 ATGGATTCGTCTTTTGAAGGTGACACACTTGATCCATCTAAATGCAGCAAGTTGAGTATGGAAGAAAAAAGAGAACTTATCTATGAGATATCCAAGTCCCAGGGTGCATCAGAGATGTTACAGTCATGGAGCCGACAAGAGATTTTGAAAATTCTGTGTGCAGAGATGGGTAAAGAAAGAAAGTATACTGGCTTGACAAAGTTGAAAATCATAGAAAATCTTTTAAAAATTGTCTCTGAAAAGAAATCTGGAAACCAGGAAATTACAACAGATCTTGAACCACTTTCTCCTTCTGCAAATGAGCAGAAACCAGCTAAAAGGCAGAGAAAAACAGAGAATCCATCTCGATTGCCTATTCCAGCAAGCAATAGTCCAATCACTAACGGCAATGGAGATTTAGGCAGTAGTAGCACTACGTATTGTAAAAATTCAGCTTGCAAAGCCACCCTAAGTCAAGCAGATGTATTTTGCAAAAGATGCTCGTGCTGCATTTGTCATCAATATGATGACAACAAAGATCCTAGCCTGTGGTTAATATGTAACTCTGACCCTCCATTTCATGGTGTTTCTTGTGGCTTGTCATGCCATCTTGAATGTGCTTTAAAACATTATGGTTCCGGCATTGCCAAAAATGGAGTGCATCCCAAGCTTGATGGGAGTTTCTACTGTGTCTCATGTGGGAAAGTAAATGATTTGCTCGGATGTTGTAGAAAACAACTGTCAATGGGAAAGTGCACCAGGCGTGTGGACATTCTCTGCTATCGTCTCTCCTTGACCCAAAAACTTTTACAAGGGACTGAAAAGTATAAAAAAATTTATGAAATAATTGATGAGGCTGTGAAGAAACTTGAACCTGAGGTTGGCCCATTAACTAGTTCGCCAGTGAAGATTGGTAGGGGAATTGTCAACAGACTTTCATCAGGACCAGAGGTCCAGAAACTCTGTGGTTCTGCTTTGGAATCGCTGGATTCATCACTTTCTGAAATGCTTTTGCCTCCATCATCGAGTCCAACATATTTAGATACAAAATTGGTCGCTTCAGATATGGTGGGATTTGAAGATGTCACTGCGACATCACTAACTGTAGTTTTGGGCTCTGAAAATCGATCTGGGGAAAAAATTGTTGGTTACAACTTGTGGCATCGGGTGGCTCATGGCACAGACTATCCCTTGGACTCAACTTGCACATTGCATCCACCAGACAGAAGGTTTACCATCAGGGATCTAATTCCAGCCACAGAATACATCTTCAAAGCTGTCGCCTTCAATCATTCTAGGGAGTTGAGCATGTGTGAAGTCCATGTTTTGACGGAGCAAGGTGAGGAAGAAGCACCCAACTGCTCAACAACAGAAAGAAGTCAGAGCCCAGTAACAAACTGTAGCAGCCTTTCCAATCCTTCTTCAGCAGAACATGAAACTAACAACAGTAAGCCATATTGTGACCAGACCAATAACCGAGTGGAGAATCATCGTACTGATCAAAAGGACATTGACAAACTTGCTTCAGGAATTTTATCCAATGACCCCACTAACTGTTCCAACATAGGCGAAGATAGACTTCCAGCTGATGCTGATTCCTTACCGGACAAGGAACATACTGCAGGAAAGACTGGGCCTTTACCTTGTTCTGAGAAAAAGCACTCCCCAGAGGAGCAAGTCACTGAGGACATGAGCATTGATAACGGGCTTAAATCTTCGGCTCAGGCTGGGAGGGACCGTGTTTTATTAGCAAGTAGCTCAGAGGAAGGCCTTCCCATTACTCCATGCAAGTTGGAAATGCTTAAGGATGGGCCCGGAAGAAAGGGGAAGTCCAAATCCAGTGGCAAGGCCAAGGATCAAGAAAATGAGTCTGGGAAGAGAAAATGCCCTCAAGACGGAACCAAATCACAGAAGAGAAATGGGGAAAGGCAGCAACAAGTTGAGGAGTGTGATGCAGATGGGTTTTCTTCTGATGGCGATTTTGAGTATTATGTTAAAGTGATTAGAAGGTTAGAGTGTGAAGGACATTTAGAGAAGAACTTTAGGCAGAAATTTCTGACTTGGTACAGCTTGAGAGCAACAGCCCAAGAAATTAGGGTTGTGAAAGTATATATTGATACCTTCATTGAAGATCCAACTTCTCTTGCAGAGCAGCTTGCGGACACCTTCTCAGATTGCGTATCAAGCAAGAAAACATCTATGGTGCCACCAGGGTTCTGCATGAAGCTTTGGCATTAA 2217 0.4263 MDSSFEGDTLDPSKCSKLSMEEKRELIYEISKSQGASEMLQSWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGNQEITTDLEPLSPSANEQKPAKRQRKTENPSRLPIPASNSPITNGNGDLGSSSTTYCKNSACKATLSQADVFCKRCSCCICHQYDDNKDPSLWLICNSDPPFHGVSCGLSCHLECALKHYGSGIAKNGVHPKLDGSFYCVSCGKVNDLLGCCRKQLSMGKCTRRVDILCYRLSLTQKLLQGTEKYKKIYEIIDEAVKKLEPEVGPLTSSPVKIGRGIVNRLSSGPEVQKLCGSALESLDSSLSEMLLPPSSSPTYLDTKLVASDMVGFEDVTATSLTVVLGSENRSGEKIVGYNLWHRVAHGTDYPLDSTCTLHPPDRRFTIRDLIPATEYIFKAVAFNHSRELSMCEVHVLTEQGEEEAPNCSTTERSQSPVTNCSSLSNPSSAEHETNNSKPYCDQTNNRVENHRTDQKDIDKLASGILSNDPTNCSNIGEDRLPADADSLPDKEHTAGKTGPLPCSEKKHSPEEQVTEDMSIDNGLKSSAQAGRDRVLLASSSEEGLPITPCKLEMLKDGPGRKGKSKSSGKAKDQENESGKRKCPQDGTKSQKRNGERQQQVEECDADGFSSDGDFEYYVKVIRRLECEGHLEKNFRQKFLTWYSLRATAQEIRVVKVYIDTFIEDPTSLAEQLADTFSDCVSSKKTSMVPPGFCMKLWH 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1206 738 MobiDBLite consensus disorder prediction 484 498 - -
Acco13g1206 738 Gene3D Immunoglobulins 348 462 IPR013783 -
Acco13g1206 738 SUPERFAMILY Fibronectin type III 352 425 IPR036116 GO:0005515
Acco13g1206 738 CDD FN3 350 423 IPR003961 GO:0005515
Acco13g1206 738 MobiDBLite consensus disorder prediction 587 645 - -
Acco13g1206 738 MobiDBLite consensus disorder prediction 441 559 - -
Acco13g1206 738 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Acco13g1206 738 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 738 IPR044514 GO:0010048|GO:0040029
Acco13g1206 738 MobiDBLite consensus disorder prediction 594 642 - -
Acco13g1206 738 MobiDBLite consensus disorder prediction 86 129 - -
Acco13g1206 738 MobiDBLite consensus disorder prediction 115 129 - -
Acco13g1206 738 CDD PHD_VIN3_plant 161 226 - -
Acco13g1206 738 MobiDBLite consensus disorder prediction 442 483 - -
Acco13g1206 738 ProSiteProfiles Fibronectin type-III domain profile. 345 441 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1206 Acco-ChrAcco13 10298547 10302851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1206 1 475 PHD Gene Family AT4G30200 55.138 8.21e-163 482