Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1205 ATGGACTCTTCTTCTTCCTCCTCAAACTGGCTCGCTTTCTCTCTGTCCCACCCCTTATCTTCCTCTTCCCACTTCCCTCTCTTCCCTTCCTTCACTTCCCCTTCCCCTACCCCCACTCTCTCTCTCACAGGTAACACCACCGTCGTCGACGCGCCGGCTGAAACCAAAGATGGTGGTGCGGTCACAGGAGCACCGACTAGCCTCTCCATGTTCACTGAGGGACCTAAGTTCGAGGACTTCCTCGGCGGAGCTGCCGCCCCTACAGTTCCCGCGCCGCCCTCGCAGTTCTCCGCTGACAACACGCTGAGCACGGTGGTTGAGAACGAGATATACGATTCCGAGCTGAAAACCATAGCCGCCGGTTTCCTTCGTGGCTTTGCCTCCGGAGGAGCGCAAGCGGAGCCGCAACAGAAACAGGCTCAGATGATACCAATAGAGCCTTCGCCGAAGAAGAGCGTCGATACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACACGGCATAGATGGACAGGAAGGTACGAAGCTCATCTGTGGGATAACAGTTGCAGAAGAGAGGGGCAAAGTCGGAAAGGAAGACAAGGTGGCTACGATAAGGAAGAGAAGGCAGCCAGGGCTTATGATCTCGCCGCTCTCAAGTACTGGGGTCCGACCACCACCACCAACTTTCCGATTGAAAACTACCAGAAGGAACTGGAAGAGATGAAGAGTATGACAAGGCAGGAATTTGTTGCTTCTCTTCGAAGGAGGAGTAGTGGATTCTCGAGAGGCGCCTCAATATATAGAGGAGTGACGAGGCATCACCAGCATGGCCGATGGCAGGCAAGGATAGGCAGAGTCGCCGGAAACAAAGACCTCTACCTTGGCACTTTCAGTACTCAAGAGGAAGCAGCGGAGGCGTATGATATAGCGGCCATTAAGTTCAGAGGAATCAACGCAGTGACCAACTTTGACATGAGCCGCTACGACGTGAAGAGCATTGCCAACAGTAGCCTTCCTGTTGGCGGACTCTCCGGCAAGACCAAGAACACGACGGATTCTTCTTTGTCCGACCACCACCACACTAGCAAGAGCCCTGACGCTGACAGAGACCTCTCCTCCAATTCCTCGGTCACTTTTGCATCCCAAGCGCCACCGCCACCTTCAAGCATTAATAACAATTCTCTCACCTTCGCCATACCCATCAAACATGACCCTACTTCAGATCATCATTACTGGTCCTCCGTTCTCACCGGTTACAATAAAAACCCTACCTTGATCCAACCATCTTCCTCCACCAATGGCTCCGTGACATCTGTCCTACCCTTCAACGTGGACCTCTCTACAGCTCCCTCCAGTACCAGCAGTGAAGGAAACAACATCAACTACAATAATCATAATAATGGTTTTTTCAGCGGAGGAGGCATGCTTGTTCATCAGCAACAACAACAAAGTGGGAATAACAATAATAATAATAATAGCGGTGGTGGTTCGTCGTCTCCTTCTGGATCGAGTTCATTGATGATCCCATTGGCCACGCCCATTGCCTTAAATAGTAATCCTAGTTCTGAGAGCTCTTCTTCTGGTTATGGAAACTGGAGCATCATTGGGCCTACCCTGCACACTTTCCAAACCCATGCAAAACCCAGTCTTTTTCAAACCCCAATTTTTGGCATGGAATAA 1665 0.5159 MDSSSSSSNWLAFSLSHPLSSSSHFPLFPSFTSPSPTPTLSLTGNTTVVDAPAETKDGGAVTGAPTSLSMFTEGPKFEDFLGGAAAPTVPAPPSQFSADNTLSTVVENEIYDSELKTIAAGFLRGFASGGAQAEPQQKQAQMIPIEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTTTTNFPIENYQKELEEMKSMTRQEFVASLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGINAVTNFDMSRYDVKSIANSSLPVGGLSGKTKNTTDSSLSDHHHTSKSPDADRDLSSNSSVTFASQAPPPPSSINNNSLTFAIPIKHDPTSDHHYWSSVLTGYNKNPTLIQPSSSTNGSVTSVLPFNVDLSTAPSSTSSEGNNINYNNHNNGFFSGGGMLVHQQQQQSGNNNNNNNSGGGSSSPSGSSSLMIPLATPIALNSNPSSESSSSGYGNWSIIGPTLHTFQTHAKPSLFQTPIFGME 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1205 554 ProSiteProfiles AP2/ERF domain profile. 162 225 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 MobiDBLite consensus disorder prediction 334 389 - -
Acco13g1205 554 PRINTS Ethylene responsive element binding protein signature 163 174 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 PRINTS Ethylene responsive element binding protein signature 301 321 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 CDD AP2 260 321 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 MobiDBLite consensus disorder prediction 363 389 - -
Acco13g1205 554 Gene3D AP2/ERF domain 162 227 IPR036955 GO:0003700|GO:0006355
Acco13g1205 554 Gene3D AP2/ERF domain 261 321 IPR036955 GO:0003700|GO:0006355
Acco13g1205 554 SUPERFAMILY DNA-binding domain 161 227 IPR016177 GO:0003677
Acco13g1205 554 FunFam AP2-like ethylene-responsive transcription factor ANT 161 227 - -
Acco13g1205 554 ProSiteProfiles AP2/ERF domain profile. 261 319 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 128 442 - -
Acco13g1205 554 MobiDBLite consensus disorder prediction 347 362 - -
Acco13g1205 554 CDD AP2 161 226 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 FunFam AP2-like ethylene-responsive transcription factor 260 321 - -
Acco13g1205 554 SMART rav1_2 162 231 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 SMART rav1_2 261 325 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 MobiDBLite consensus disorder prediction 466 502 - -
Acco13g1205 554 SUPERFAMILY DNA-binding domain 260 321 IPR016177 GO:0003677
Acco13g1205 554 Pfam AP2 domain 261 311 IPR001471 GO:0003700|GO:0006355
Acco13g1205 554 Pfam AP2 domain 162 217 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1205 Acco-ChrAcco13 10269397 10272505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1205 109 418 AP2-EREBP Transcription Factor Family AT5G57390 66.463 7.81e-143 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco13g1205 AP2 1.1e-09 CL0081