Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1191 ATGGGTCGAGCTCCATGCTGTGACAAAGCGAACGTGAAGAGAGGACCTTGGTCTCCAGAAGAGGATGCTATACTCAAAGCATATATCGATCAAAATGGAACTGGAGGCAACTGGATAGCTCTTCCTCAAAAAATTGGGCTGAAGAGGTGCGGGAAAAGTTGCAGGCTAAGATGGTTAAATTACCTAAGGCCTAATATCAAGCATGGTGGTTTCACTGAAGAAGAAGACAACATCATTAGCAGCCTCTACATTAGCATTGGCAGCAGGTGGTCCATCATTGCCGCTCAGCTTCCTGGAAGAACAGACAACGACATCAAGAATTATTGGAACACAAGACTGAAGAAGAAGCTACTAGGCAGGCGCAACAAAAAAGACAACACTTCATCAGATCACGACAACCCTAATAATTCTGATCACACCCTCAGCAACTCAGCTCTTGAAAGGCTTCAACTTCACATGCAACTTCAAAACCCTAGTCATAATAATAATAATTTCTCTTTCTACAACAGCAATCCTTCCCTATGGCCTAAGTTGCATCCTCTCCAACAAAAACTCATCTCCAACACCCTACAATCCCTCAACCATACCTCTCATTTCACAACCATTCCACAAACAGATAATACTCAACTTTACAATGAACCAGCATCTGCTAATTACACTACTACTGATAATGATGATGCAGTTCAACCAGAAGGTGTCAAGATCAGCAACAGGCCGGTGACCGGTAATCCGGCGGAAATGGGCCAGGTTGATCAGTTTGATGTGGGAGTGGATCAAATTTCTGCACTTCAAATTGAGCTTGATGAAATTCTCATGAGTGGTAACGTGGCAACATCGTCGCAGAAGCAGGAGGAGCAGGAGCAGGTGGGTGGCTATGGTTGTTTCGGAGAGATCATGAGTGGTTTTTCACCGAAGGACAATTTGAGCTGGTGGTCTAATGATTTGGATGCCAAGTCTGCATCCTCAAACTCTTGGGATTCGACTACCACTACTCCTCAGATTCTTCAGACAGGTGATCAGGGGATGTTTCAAGATTATGAGCTAGGTTATATTTTGTAG 1059 0.441 MGRAPCCDKANVKRGPWSPEEDAILKAYIDQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIISSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRNKKDNTSSDHDNPNNSDHTLSNSALERLQLHMQLQNPSHNNNNFSFYNSNPSLWPKLHPLQQKLISNTLQSLNHTSHFTTIPQTDNTQLYNEPASANYTTTDNDDAVQPEGVKISNRPVTGNPAEMGQVDQFDVGVDQISALQIELDEILMSGNVATSSQKQEEQEQVGGYGCFGEIMSGFSPKDNLSWWSNDLDAKSASSNSWDSTTTTPQILQTGDQGMFQDYELGYIL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1191 352 MobiDBLite consensus disorder prediction 119 141 - -
Acco13g1191 352 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Acco13g1191 352 SMART sant 13 64 IPR001005 -
Acco13g1191 352 SMART sant 67 115 IPR001005 -
Acco13g1191 352 CDD SANT 71 113 IPR001005 -
Acco13g1191 352 FunFam Transcription factor RAX3 7 68 - -
Acco13g1191 352 Gene3D - 7 68 - -
Acco13g1191 352 PANTHER OS09G0431300 PROTEIN 1 238 - -
Acco13g1191 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Acco13g1191 352 FunFam Transcription factor MYB36 70 139 - -
Acco13g1191 352 CDD SANT 16 62 IPR001005 -
Acco13g1191 352 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Acco13g1191 352 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Acco13g1191 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Acco13g1191 352 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco13g1191 352 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Acco13g1191 352 Gene3D - 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1191 Acco-ChrAcco13 10117726 10119684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1191 1 188 MYB Transcription Factor Family AT5G57620 73.096 4.53e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco13g1191 Myb_DNA-binding 3.6e-12 CL0123